BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
19361at6073Duplicated904.7592.0aint_s0271.g41.t1calcyphosin-2JBrowse
19367at6073Complete964.8610.0aint_s0135.g39.t1LIM domain kinase 1JBrowse
19399at6073Complete1067.1657.0aint_s0348.g8.t1mannan-binding lectin serine protease 1JBrowse
19442at6073Complete1096.6516.0aint_s0451.g7.t1inositol-3-phosphate synthaseJBrowse
19466at6073Fragmented240.6224.0aint_s0106.g28.t1histone acetyltransferase KAT6A-likeJBrowse
19479at6073Duplicated784.8410.0aint_s0030.g1.t1cyclic GMP-AMP synthaseJBrowse
19479at6073Duplicated784.4410.0aint_s0489.g18.t1cyclic GMP-AMP synthaseJBrowse
19493at6073Complete432.1276.0aint_s0208.g7.t1RNA-binding protein 24-likeJBrowse
19531at6073Complete1432.2937.0aint_s0118.g13.t1tectonin beta-propeller repeat-containing protein 1JBrowse
19553at6073Complete596.8334.0aint_s0239.g17.t1protein NDRG1-likeJBrowse
19600at6073Duplicated531.0333.0aint_s0010.g35.t2glycosyltransferase 1 domain-containing protein 1JBrowse
19600at6073Duplicated525.4333.0aint_s0010.g35.t1glycosyltransferase 1 domain-containing protein 1JBrowse
19600at6073Duplicated468.8318.0aint_s0010.g35.t3glycosyltransferase 1 domain-containing protein 1JBrowse
19608at6073Complete1388.3745.0aint_s0378.g7.t1phosphatidylinositide phosphatase SAC2-likeJBrowse
19638at6073Fragmented334.3175.0aint_s0047.g49.t1protein AKTIP homologJBrowse
19661at6073Complete472.3270.0aint_s0047.g32.t1transcription factor Sox-14-likeJBrowse
19712at6073Complete232.8131.0aint_s0184.g74.t139S ribosomal protein L23, mitochondrial-likeJBrowse
19713at6073Complete1804.01254.0aint_s0029.g52.t1Partitioning defective 3JBrowse
19725at6073Duplicated1003.6590.0aint_s0003.g71.t1Translation initiation factor IF-2JBrowse
19725at6073Duplicated1000.9590.0aint_s0003.g71.t2Translation initiation factor IF-2JBrowse
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