BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
12845at6073Complete568.8306.0XP_074611938.1protein YIPF1-likeJBrowse
12900at6073Complete517.8387.0XP_074620165.1uncharacterized protein LOC122946992JBrowse
12912at6073Complete2010.7942.0XP_074613136.1coatomer subunit betaJBrowse
12919at6073Duplicated455.9273.0XP_074625482.1protein-S-isoprenylcysteine O-methyltransferase-likeJBrowse
12919at6073Duplicated455.9273.0XP_074625483.1protein-S-isoprenylcysteine O-methyltransferase-likeJBrowse
12980at6073Complete1037.4746.0XP_074614505.1uncharacterized protein LOC114955734 isoform X1JBrowse
12994at6073Complete596.7312.0XP_074608478.1ribose-phosphate pyrophosphokinase 4JBrowse
13010at6073Complete344.5219.0XP_074620338.1transcription cofactor vestigial-like protein 4JBrowse
13022at6073Complete1196.6666.0XP_074623504.1DNA (cytosine-5)-methyltransferase 3AJBrowse
13033at6073Duplicated2344.91118.0XP_074619709.1phospholipid-transporting ATPase IA-likeJBrowse
13033at6073Duplicated2344.91117.0XP_074619710.1phospholipid-transporting ATPase IA-likeJBrowse
13037at6073Complete608.7332.0XP_074615165.14-hydroxy-2-oxoglutarate aldolase, mitochondrial-likeJBrowse
13042at6073Complete1095.9513.0XP_074621289.1E3 ubiquitin-protein ligase arih1-likeJBrowse
13067at6073Complete552.0286.0XP_074612991.1thioredoxin-like protein 1JBrowse
13093at6073Complete225.3150.0XP_074637983.1acyl carrier protein-likeJBrowse
13158at6073Complete652.1291.0XP_074639411.1Meiotic recombination protein dmc1JBrowse
13160at6073Complete1458.8773.0XP_074623013.1Tuftelin-interacting 11JBrowse
13196at6073Complete382.4226.0XP_074634857.150S ribosomal protein L17JBrowse
13237at6073Duplicated422.1207.0XP_074626951.1pre-mRNA-splicing factor SPF27-likeJBrowse
13237at6073Duplicated392.2207.0XP_074626950.1pre-mRNA-splicing factor SPF27-likeJBrowse
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