BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
19744at6073Complete471.3306.0aint_s0307.g26.t1sperm flagellar protein 1-likeJBrowse
19748at6073Duplicated1727.81440.0aint_s0063.g9.t1peripheral-type benzodiazepine receptor-associated protein 1JBrowse
19748at6073Duplicated1726.41440.0aint_s0063.g9.t2peripheral-type benzodiazepine receptor-associated protein 1JBrowse
19753at6073Duplicated1188.7622.0aint_s0654.g5.t2katanin-interacting proteinJBrowse
19753at6073Duplicated1188.4622.0aint_s0654.g5.t1katanin-interacting proteinJBrowse
19779at6073Duplicated605.7371.0aint_s0294.g15.t1coiled-coil domain-containing protein 42 homologJBrowse
19779at6073Duplicated603.6371.0aint_s0294.g15.t2coiled-coil domain-containing protein 42 homologJBrowse
19786at6073Complete589.6350.0aint_s0075.g32.t1ubiquitin-associated domain-containing protein 1JBrowse
19791at6073Complete284.3148.0aint_s0181.g35.t139S ribosomal protein L11, mitochondrial-likeJBrowse
19811at6073Fragmented123.478.0aint_s0185.g32.t1probable cytokinin riboside 5 -monophosphate phosphoribohydrolase LOG4JBrowse
19848at6073Complete417.7243.0aint_s0099.g11.t1bridging integrator 3JBrowse
19878at6073Complete444.9333.0aint_s0112.g18.t1serine/threonine-protein phosphatase 4 regulatory subunit 2-AJBrowse
19922at6073Complete1415.4854.0aint_s0639.g6.t1Leucine-rich repeat and IQ domain-containing 3JBrowse
19967at6073Complete904.1448.0aint_s0366.g16.t1pre-B-cell leukemia transcription factor 1JBrowse
19998at6073Complete1958.11196.0aint_s0276.g2.t1tubulin polyglutamylase TTLL5JBrowse
20064at6073Duplicated247.6186.0aint_s0259.g6.t2fibroblast growth factor 1JBrowse
20064at6073Duplicated245.2184.0aint_s0259.g6.t3fibroblast growth factor 1JBrowse
20073at6073Complete498.2514.0aint_s0033.g17.t1PWWP domain-containing protein 2A-likeJBrowse
20117at6073Complete829.3447.0aint_s0155.g11.t1Suppressor of fusedJBrowse
20136at6073Complete490.8235.0aint_s0015.g45.t1ubiquitin-conjugating enzyme E2 R2JBrowse
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