BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
13295at6073Complete506.1304.0XP_074611270.1zinc finger protein 367JBrowse
13296at6073Complete575.4299.0XP_074631882.1Serine/threonine-protein phosphatase 2A activatorJBrowse
13314at6073Complete411.5235.0XP_074607325.1elongation of very long chain fatty acids protein 4-likeJBrowse
13329at6073Complete475.5240.0XP_074612149.1dihydropteridine reductase-likeJBrowse
13403at6073Complete1041.9658.0XP_074615560.1disintegrin and metalloproteinase domain-containing protein 10JBrowse
13406at6073Complete220.6121.0XP_074616120.1Zinc finger, RING-typeJBrowse
13408at6073Complete924.3515.0XP_074632955.1synaptic functional regulator FMR1-likeJBrowse
13432at6073Complete529.0269.0XP_074616578.1uncharacterized protein F13E9.13, mitochondrial-likeJBrowse
13439at6073Duplicated742.6420.0XP_074620298.1U3 small nucleolar RNA-interacting protein 2JBrowse
13439at6073Duplicated737.1420.0XP_074620297.1U3 small nucleolar RNA-interacting protein 2JBrowse
13441at6073Complete631.6422.0XP_074636803.1synaptotagmin-4-like isoform X1JBrowse
13458at6073Duplicated983.8440.0XP_074631171.1COP9 signalosome complex subunit 2JBrowse
13458at6073Duplicated983.8440.0XP_074631172.1COP9 signalosome complex subunit 2JBrowse
13459at6073Complete329.0308.0XP_074639320.1uncharacterized protein LOC110049868JBrowse
13510at6073Duplicated1502.0756.0XP_074608971.1vacuolar protein sorting-associated protein 51 homologJBrowse
13510at6073Duplicated1501.9756.0XP_074608964.1vacuolar protein sorting-associated protein 51 homologJBrowse
13519at6073Complete372.0198.0XP_074617835.1COMM domain-containing protein 4JBrowse
13534at6073Complete510.7248.0XP_074625563.1CTD nuclear envelope phosphatase 1A-likeJBrowse
13554at6073Complete1559.61051.0XP_074616539.1beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X1JBrowse
13602at6073Complete735.6434.0XP_074636446.1proline dehydrogenase 1, mitochondrial-likeJBrowse
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