BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
20137at6073Duplicated870.3494.0aint_s0002.g74.t2Protein lin-9JBrowse
20137at6073Duplicated869.4494.0aint_s0002.g74.t1Protein lin-9JBrowse
20179at6073Complete837.5538.0aint_s0200.g7.t1trichohyalinJBrowse
20232at6073Complete253.3195.0aint_s0400.g12.t1Protein phosphatase 1 regulatory subunit 35, C-terminalJBrowse
20254at6073Duplicated836.1562.0aint_s0070.g31.t1dnaJ homolog subfamily C member 21JBrowse
20254at6073Duplicated781.2526.0aint_s4489.g1.t1dnaJ homolog subfamily C member 21JBrowse
20273at6073Complete893.6591.0aint_s0119.g25.t1protein regulator of cytokinesis 1JBrowse
20284at6073Duplicated1363.9773.0aint_s0015.g26.t1tubulin polyglutamylase ttll6-likeJBrowse
20284at6073Duplicated1355.5773.0aint_s0015.g26.t2tubulin polyglutamylase ttll6-likeJBrowse
20323at6073Complete881.3622.0aint_s0088.g6.t1X-ray radiation resistance-associated protein 1JBrowse
20328at6073Duplicated1269.4734.0aint_s0110.g34.t1protein O-mannosyl-transferase TMTC2JBrowse
20328at6073Duplicated1246.6734.0aint_s0110.g34.t2protein O-mannosyl-transferase TMTC2JBrowse
20330at6073Fragmented700.4510.0aint_s0010.g135.t1Histone-lysine N-methyltransferase, H3 lysine-79 specificJBrowse
20340at6073Complete398.3249.0aint_s0055.g130.t2N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-likeJBrowse
20343at6073Complete1326.9699.0aint_s0120.g23.t1dual specificity tyrosine-phosphorylation-regulated kinase 1AJBrowse
20410at6073Complete1072.7710.0aint_s0059.g52.t1peptidyl-glycine alpha-amidating monooxygenase AJBrowse
20411at6073Duplicated1861.7890.0aint_s0309.g3.t1cytoplasmic aconitate hydratase-likeJBrowse
20411at6073Duplicated1841.1890.0aint_s0309.g3.t2cytoplasmic aconitate hydratase-likeJBrowse
20413at6073Complete658.5319.0aint_s0030.g16.t1tumor suppressor candidate 3JBrowse
20450at6073Complete247.3169.0aint_s0184.g77.t1transmembrane protein 9B-likeJBrowse
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