BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 2,721 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
25172at6073Complete486.6365BRAKERHOCP00005020141.1Cytoplasmic protein nck1JBrowse
25180at6073Complete413.9326BRAKERHOCP00005011398.1Ribosome biogenesis regulatory proteinJBrowse
25221at6073Complete700.2565BRAKERHOCP00005010191.1forkhead box protein K2-likeJBrowse
25270at6073Complete293.6199BRAKERHOCP00005015336.1repressor of RNA polymerase III transcription MAF1 homologJBrowse
25348at6073Complete214.5222BRAKERHOCP00005010623.1pyridoxal phosphate phosphatase PHOSPHO2-likeJBrowse
25366at6073Duplicated359.1209BRAKERHOCP00005003131.1Osteoclast-stimulating factor 1JBrowse
25366at6073Duplicated346.6209BRAKERHOCP00005000262.1Osteoclast-stimulating factor 1JBrowse
25371at6073Complete187.7162BRAKERHOCP00005017235.1nucleolar protein 16JBrowse
25449at6073Fragmented230.0256BRAKERHOCP00005014107.1heat shock factor 2-binding protein-likeJBrowse
25456at6073Complete245.4320BRAKERHOCP00005021045.1upstream stimulatory factor 1JBrowse
25469at6073Complete265.4290BRAKERHOCP00005005946.1alpha-2-macroglobulin receptor-associated proteinJBrowse
25507at6073Complete426.3204BRAKERHOCP00005001956.160S ribosomal protein L15JBrowse
25530at6073Complete171.6184BRAKERHOCP00005012639.1vacuolar protein sorting-associated protein 37B-likeJBrowse
25558at6073Complete162.8206BRAKERHOCP00005017695.1homeobox protein Hox-A7-likeJBrowse
25560at6073Complete241.6180BRAKERHOCP00005005558.1bcl-2-like protein 1-likeJBrowse
25617at6073Complete221.5157BRAKERHOCP00005020714.1Zinc finger HIT domain-containing protein 1JBrowse
25633at6073Complete1073.0937BRAKERHOCP00005004379.1pumilio homolog 2JBrowse
25651at6073Complete532.5359BRAKERHOCP00005016509.1beta-parvin-likeJBrowse
25705at6073Complete232.2174BRAKERHOCP00005009406.1Josephin-2JBrowse
25713at6073Complete210.7184BRAKERHOCP00005005239.1mitochondrial import inner membrane translocase subunit Tim29JBrowse
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