BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
20539at6073Complete351.9207.0aint_s0037.g6.t1ceramide-1-phosphate transfer proteinJBrowse
20546at6073Complete759.5413.0aint_s0029.g96.t13-oxoacyl-JBrowse
20581at6073Complete443.7251.0aint_s0106.g21.t1COP9 signalosome complex subunit 7bJBrowse
20595at6073Complete679.6438.0aint_s0056.g71.t1iroquois-class homeodomain protein IRX-4JBrowse
20612at6073Complete806.2342.0aint_s0413.g20.t2synaptotagmin-7JBrowse
20647at6073Fragmented138.273.0aint_s0154.g19.t1N-alpha-acetyltransferase 10JBrowse
20696at6073Duplicated2130.21195.0aint_s0199.g18.t1protein scribble homologJBrowse
20696at6073Duplicated2114.31195.0aint_s0199.g18.t2protein scribble homologJBrowse
20707at6073Complete294.8188.0aint_s0195.g13.t1GS homeobox 1JBrowse
20723at6073Fragmented651.6443.0aint_s0017.g94.t1PDZ domain-containing protein 7JBrowse
20765at6073Complete527.7318.0aint_s0418.g3.t1Enkurin domain-containing protein 1JBrowse
20793at6073Fragmented196.1105.0aint_s0252.g25.t1splicing factor U2AF 26 kDa subunit-likeJBrowse
20809at6073Complete1141.8692.0aint_s0061.g44.t1myotubularin-related protein 10-AJBrowse
20854at6073Complete1446.81036.0aint_s0003.g89.t1tau-tubulin kinase homolog AsatorJBrowse
20855at6073Complete744.3403.0aint_s0039.g60.t1lanC-like protein 2JBrowse
20856at6073Complete481.8244.0aint_s0038.g17.t140S ribosomal protein S6JBrowse
20875at6073Complete390.8206.0aint_s0290.g3.t1Zinc finger CCHC-type and RNA-binding motif-containing protein 1JBrowse
20934at6073Duplicated500.6389.0aint_s0074.g13.t3caspase-3JBrowse
20934at6073Duplicated494.3388.0aint_s0074.g13.t4caspase-3JBrowse
20935at6073Complete388.5200.0aint_s0001.g52.t160S ribosomal protein L13a-likeJBrowse
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