BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
13980at6073Complete614.9371.0XP_074637673.1lysine-specific demethylase 8-likeJBrowse
13982at6073Complete550.9272.0XP_074619787.1autophagy protein 5-likeJBrowse
14048at6073Complete944.5665.0XP_074621386.1tyrosine-protein kinase RYK-likeJBrowse
14064at6073Complete621.6347.0XP_074625993.1prostaglandin reductase 2JBrowse
14069at6073Duplicated1249.1735.0XP_074634365.1Integrator complex subunit 10JBrowse
14069at6073Duplicated1242.6735.0XP_074634366.1Integrator complex subunit 10JBrowse
14083at6073Duplicated497.6287.0XP_074620681.1ELMO domain-containing protein 2JBrowse
14083at6073Duplicated497.4287.0XP_074620679.1ELMO domain-containing protein 2JBrowse
14083at6073Duplicated497.4287.0XP_074620680.1ELMO domain-containing protein 2JBrowse
14136at6073Complete640.0449.0XP_074634832.1golgin-45-likeJBrowse
14176at6073Complete379.5245.0XP_074637000.1Replication protein A 32 kDa subunitJBrowse
14194at6073Complete485.4419.0XP_074617915.1uncharacterized protein LOC116294854JBrowse
14205at6073Complete329.8187.0XP_074619200.139S ribosomal protein L22, mitochondrial-likeJBrowse
14214at6073Duplicated850.5435.0XP_074630503.1SynaptotagminJBrowse
14214at6073Duplicated850.5435.0XP_074630504.1SynaptotagminJBrowse
14214at6073Duplicated848.3432.0XP_074630506.1SynaptotagminJBrowse
14214at6073Duplicated768.6431.0XP_074630505.1SynaptotagminJBrowse
14256at6073Duplicated563.7343.0XP_074625369.1TAR DNA-binding protein 43JBrowse
14256at6073Duplicated557.8343.0XP_074625365.1TAR DNA-binding protein 43JBrowse
14256at6073Duplicated557.8343.0XP_074625366.1TAR DNA-binding protein 43JBrowse
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