BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 2,721 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
25737at6073Complete424.3319BRAKERHOCP00005012266.1AH receptor-interactingJBrowse
25805at6073Complete648.6769BRAKERHOCP00005002409.1nonsense-mediated mRNA decay factor SMG5JBrowse
25815at6073Fragmented263.3250BRAKERHOCP00005009834.1cyclic AMP-responsive element-binding protein 1-likeJBrowse
25839at6073Fragmented316.0183BRAKERHOCP00005007429.1Beta-soluble NSF attachmentJBrowse
25895at6073Complete1373.5884BRAKERHOCP00005001616.1ras GTPase-activating protein 1-likeJBrowse
25974at6073Fragmented715.5700BRAKERHOCP00005020186.1peroxisome assembly factor 2JBrowse
26004at6073Complete428.3223BRAKERHOCP00005015020.1NADH dehydrogenaseJBrowse
26020at6073Fragmented386.5297BRAKERHOCP00005015116.128S ribosomal protein S9, mitochondrial-likeJBrowse
26029at6073Complete854.3501BRAKERHOCP00005004855.1hippocampus abundant transcript 1 protein-likeJBrowse
26078at6073Duplicated630.8512BRAKERHOCP00005015148.1radial spoke head protein 4 homolog AJBrowse
26078at6073Duplicated599.2438BRAKERHOCP00005006912.1radial spoke head protein 4 homolog AJBrowse
26082at6073Complete212.9194BRAKERHOCP00005003664.1uncharacterized protein LOC116298590JBrowse
26085at6073Complete2470.12008BRAKERHOCP00005014955.1chromodomain-helicase-DNA-binding protein 8JBrowse
26116at6073Complete1732.01071BRAKERHOCP00005009413.1ubiquitin carboxyl-terminal hydrolase 7JBrowse
26137at6073Complete435.5374BRAKERHOCP00005001069.1prolactin regulatory element-binding protein-likeJBrowse
26273at6073Complete321.0150BRAKERHOCP00005003251.1small ribosomal subunit protein uS11JBrowse
26355at6073Complete508.9544BRAKERHOCP00005007222.1inner nuclear membrane protein Man1-likeJBrowse
26367at6073Fragmented346.1373BRAKERHOCP00005006570.1rho guanine nucleotide exchange factor 10-like isoform X1JBrowse
26417at6073Complete267.7205BRAKERHOCP00005013595.1probable pyridoxal 5'-phosphate synthase subunit PDX2JBrowse
26507at6073Complete319.1219BRAKERHOCP00005006460.1N-alpha-acetyltransferase 40JBrowse
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