BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
20937at6073Fragmented647.8366.0aint_s0111.g79.t1Protein phosphatase 1 regulatory subunit 37JBrowse
20959at6073Complete1043.6519.0aint_s0493.g9.t1ran-binding protein 9JBrowse
20982at6073Fragmented584.5277.0aint_s0068.g36.t1probable tubulin polyglutamylase TTLL9JBrowse
20986at6073Complete341.4167.0aint_s0195.g15.t1Cysteine-rich hydrophobic domain-containing protein 2JBrowse
20991at6073Complete519.1375.0aint_s0339.g19.t1CDK5 and ABL1 enzyme substrate 1JBrowse
21005at6073Duplicated1098.7527.0aint_s0010.g64.t1malate synthaseJBrowse
21005at6073Duplicated1097.9526.0aint_s0010.g64.t2malate synthaseJBrowse
21040at6073Duplicated395.5278.0aint_s0244.g45.t2CDK5 regulatory subunit-associated protein 2-like isoform X1JBrowse
21040at6073Duplicated392.9275.0aint_s0244.g45.t1CDK5 regulatory subunit-associated protein 2-like isoform X1JBrowse
21070at6073Complete391.5308.0aint_s0530.g2.t2abscission/NoCut checkpoint regulator-likeJBrowse
21124at6073Complete439.3304.0aint_s0243.g12.t1Synapse-associated protein 1JBrowse
21179at6073Duplicated450.6161.0aint_s0249.g9.t2uncharacterized protein LOC116291792JBrowse
21179at6073Duplicated447.3161.0aint_s0249.g9.t1uncharacterized protein LOC116291792JBrowse
21180at6073Duplicated2288.01292.0aint_s0130.g41.t1uncharacterized protein LOC131795997 isoform X1JBrowse
21180at6073Duplicated2287.91292.0aint_s0130.g41.t2uncharacterized protein LOC131795997 isoform X1JBrowse
21247at6073Fragmented378.0189.0aint_s0083.g56.t1phosducin 3JBrowse
21278at6073Fragmented366.2201.0aint_s0581.g1.t2SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1JBrowse
21315at6073Complete307.9209.0aint_s0115.g51.t1calcyclin-binding proteinJBrowse
21340at6073Fragmented1040.9508.0aint_s0179.g3.t2probable serine incorporatorJBrowse
21345at6073Fragmented400.2237.0aint_s0369.g17.t1Golgi to ER traffic protein 4JBrowse
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