BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
21179at6073Complete334.2195.0alor_g16597.t1uncharacterized protein LOC116291792JBrowse
21180at6073Complete2285.41291.0alor_g4936.t1uncharacterized protein LOC131795997 isoform X1JBrowse
21247at6073Complete457.9237.0alor_g6867.t1phosducin 3JBrowse
21278at6073Complete573.6310.0alor_g3295.t1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1JBrowse
21315at6073Complete306.8209.0alor_g19792.t1calcyclin-binding proteinJBrowse
21340at6073Fragmented798.7506.0alor_g21475.t1probable serine incorporatorJBrowse
21345at6073Complete529.6307.0alor_g2432.t1Golgi to ER traffic protein 4JBrowse
21357at6073Complete435.3250.0alor_g18967.t1signal recognition particle receptor subunit betaJBrowse
21426at6073Complete804.9384.0alor_g11125.t1beta-ureidopropionase-likeJBrowse
21445at6073Complete755.1391.0alor_g1234.t1Heat shock protein DnaJ, cysteine-rich domainJBrowse
21446at6073Complete488.8281.0alor_g3551.t13-hydroxyisobutyrate dehydrogenase, mitochondrial-likeJBrowse
21585at6073Complete1174.6670.0alor_g10281.t1armadillo repeat-containing protein 3JBrowse
21596at6073Complete697.4375.0alor_g8051.t1protein phosphatase 1B-likeJBrowse
21604at6073Complete391.4239.0alor_g9654.t1Tetraspanin-7JBrowse
21671at6073Complete1137.7506.0alor_g14808.t1S-adenosylhomocysteine hydrolase-like protein 1JBrowse
21672at6073Fragmented490.7382.0alor_g1663.t1small conductance calcium-activated potassium channel protein 2JBrowse
21682at6073Complete586.4298.0alor_g23659.t1nicotinate-nucleotide pyrophosphorylase JBrowse
21716at6073Complete795.3422.0alor_g7467.t1Saccharopine dehydrogenase, NADP binding domainJBrowse
21775at6073Complete358.9188.0alor_g3357.t160S ribosomal protein L18JBrowse
21792at6073Complete511.3336.0alor_g7006.t1transcription factor SOX-9JBrowse
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