BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
14256at6073Duplicated557.8343.0XP_074625368.1TAR DNA-binding protein 43JBrowse
14280at6073Complete365.7182.0XP_074621636.1malignant T-cell-amplified sequence 1JBrowse
14288at6073Complete780.8494.0XP_074610822.1nucleolar complex protein 4 homologJBrowse
14308at6073Duplicated379.2195.0XP_074613631.1thymocyte nuclear protein 1JBrowse
14308at6073Duplicated379.4192.0XP_074613632.1thymocyte nuclear protein 1JBrowse
14320at6073Complete706.7456.0XP_074606112.1Usher syndrome type-1GJBrowse
14352at6073Complete890.3558.0XP_074622357.1uncharacterized protein LOC116307487JBrowse
14388at6073Complete709.4528.0XP_074607857.1protein zwilch homologJBrowse
14433at6073Duplicated736.7421.0XP_074638109.1vacuolar protein sorting-associated protein 4B-likeJBrowse
14433at6073Duplicated675.9367.0XP_074638110.1vacuolar protein sorting-associated protein 4B-likeJBrowse
14442at6073Complete561.6367.0XP_074637723.1evolutionarily conserved signaling intermediate in Toll pathway, mitochondrialJBrowse
14446at6073Complete332.8167.0XP_074622513.1sorcinJBrowse
14459at6073Complete509.1270.0XP_074619276.1exosome complex component RRP43JBrowse
14502at6073Fragmented444.5292.0XP_074606950.1growth/differentiation factor 6-A-likeJBrowse
14507at6073Complete522.9345.0XP_074618020.1SynaptotagminJBrowse
14509at6073Complete1855.91261.0XP_074636795.1Fanconi anemia group JJBrowse
14517at6073Complete229.0110.0XP_074629191.1N-alpha-acetyltransferase 20JBrowse
14525at6073Complete1134.2533.0XP_074622287.1Aspartate--tRNA ligase, cytoplasmicJBrowse
14562at6073Complete409.3204.0XP_074639333.1ubiquitin-conjugating enzyme E2 SJBrowse
14574at6073Complete741.1404.0XP_074616408.1glucose-fructose oxidoreductase domain-containing protein 1JBrowse
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