BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
24238at6073Complete299.4236.0HOLI03709.G3699ATP synthase F(0) complex subunit B1, mitochondrialJBrowse
24250at6073Complete709.3430.0HOLI01910.G5872Ankyrin repeat domain-containing protein 13CJBrowse
24258at6073Complete1840.32027.0HOLI00087.G59722rho guanine nucleotide exchange factor 17JBrowse
24260at6073Complete553.1537.0HOLI00052.G45452eEF1A lysine and N-terminal methyltransferaseJBrowse
24278at6073Complete180.9200.0HOLI02989.G11251MAD2L1-binding proteinJBrowse
24322at6073Fragmented183.7140.0HOLI00615.G3599transcription factor -likeJBrowse
24327at6073Fragmented231.5608.0HOLI00049.G362formin-like proteinJBrowse
24336at6073Complete682.1471.0HOLI00215.G48593tubulin delta chain-likeJBrowse
24416at6073Complete348.4224.0HOLI01171.G32599syntaxin-6JBrowse
24429at6073Complete150.582.0HOLI01084.G16626costars family protein ABRACLJBrowse
24533at6073Complete342.3249.0HOLI00055.G4388probable U3 small nucleolar RNA-associated protein 11JBrowse
24570at6073Complete773.2508.0HOLI00749.G27437CDK5 regulatory subunit-associated protein 3JBrowse
24579at6073Fragmented315.6264.0HOLI00995.G59502single-stranded DNA-binding protein 3-likeJBrowse
24594at6073Fragmented234.1226.0HOLI00604.G42619la-related protein 7JBrowse
24625at6073Duplicated129.075.0HOLI05022.G23307small integral membrane protein 7JBrowse
24625at6073Duplicated128.975.0HOLI00437.G48562small integral membrane protein 7JBrowse
24625at6073Duplicated111.775.0HOLI05981.G60442small integral membrane protein 7JBrowse
24653at6073Complete483.3366.0HOLI00989.G41130Actin-binding LIM 1JBrowse
24660at6073Duplicated200.5158.0HOLI02856.G15562Vitamin K epoxide reductase complex subunit 1 1JBrowse
24660at6073Duplicated200.5158.0HOLI03349.G54521Vitamin K epoxide reductase complex subunit 1 1JBrowse
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