BUSCO Gene Details in Montipora capitata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Montipora capitataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 63.3% [S: 62.7%, D: 0.5%] F: 15.4%, M: 21.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,026 (63.3%)2,009 (62.7%)17 (0.5%)494 (15.4%)683 (21.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Montipora capitata: 2,540 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
27471at6073Complete737.1392.0g1400.t1Nuclear pore complex protein Nup54JBrowse
27548at6073Complete686.4481.0g21693.t1EF-hand calcium-binding domain-containing protein 12JBrowse
27793at6073Fragmented270.2203.0g24942.t1OTU domain-containing protein 5JBrowse
27903at6073Complete560.2311.0g24168.t1RNA demethylase ALKBH5JBrowse
27921at6073Complete702.3415.0g14373.t1sphingosine-1-phosphate phosphatase 2JBrowse
27951at6073Complete688.1390.0g536.t1Voltage-dependent L-type calcium channel subunit beta-2JBrowse
27977at6073Complete294.2166.0g23509.t1histone deacetylase complex subunit SAP18JBrowse
28012at6073Fragmented828.7447.0g13652.t1Myotubularin-related protein 6JBrowse
28023at6073Complete385.0202.0g6693.t1UPF0598 protein CG30010JBrowse
28035at6073Complete683.8378.0g13434.t1phosphatidylinositol 5-phosphate 4-kinase type-2 alpha-likeJBrowse
28093at6073Complete451.7276.0g6903.t1homeobox protein Nkx-2.5JBrowse
28094at6073Complete458.0270.0g13092.t1AN1-type zinc finger protein 2A-likeJBrowse
28102at6073Fragmented154.883.0g29555.t1protein PBDC1-likeJBrowse
28107at6073Complete294.4147.0g14396.t1allograft inflammatory factor 1JBrowse
28113at6073Fragmented468.9290.0g6874.t1cyclin-dependent kinase-like 2JBrowse
28165at6073Complete487.9236.0g27585.t1homeobox protein SIX6-likeJBrowse
28180at6073Complete418.1252.0g6387.t1dnaJ homolog subfamily C member 9JBrowse
28296at6073Complete496.7327.0g28262.t139S ribosomal protein L37, mitochondrialJBrowse
28298at6073Complete329.6233.0g16089.t1eukaryotic translation initiation factor 2JBrowse
28322at6073Complete1043.4702.0g13590.t1ski oncogene-likeJBrowse
Go to page: of 127 pages
TOP