BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
21357at6073Complete439.6250.0aint_s0085.g31.t1signal recognition particle receptor subunit betaJBrowse
21426at6073Complete803.1383.0aint_s0010.g90.t1beta-ureidopropionase-likeJBrowse
21445at6073Complete754.8391.0aint_s0320.g6.t1Heat shock protein DnaJ, cysteine-rich domainJBrowse
21446at6073Complete552.4285.0aint_s0125.g43.t13-hydroxyisobutyrate dehydrogenase, mitochondrial-likeJBrowse
21585at6073Duplicated1598.9826.0aint_s0188.g20.t2armadillo repeat-containing protein 3JBrowse
21585at6073Duplicated1526.3826.0aint_s0188.g20.t1armadillo repeat-containing protein 3JBrowse
21596at6073Duplicated698.2375.0aint_s0016.g22.t1protein phosphatase 1B-likeJBrowse
21596at6073Duplicated671.5356.0aint_s0016.g22.t2protein phosphatase 1B-likeJBrowse
21604at6073Complete389.2239.0aint_s0177.g12.t1Tetraspanin-7JBrowse
21671at6073Duplicated1139.3506.0aint_s0008.g20.t2S-adenosylhomocysteine hydrolase-like protein 1JBrowse
21671at6073Duplicated1092.8478.0aint_s0008.g20.t1S-adenosylhomocysteine hydrolase-like protein 1JBrowse
21672at6073Complete767.8490.0aint_s0026.g35.t1small conductance calcium-activated potassium channel protein 2JBrowse
21716at6073Complete675.9363.0aint_s0287.g29.t1Saccharopine dehydrogenase, NADP binding domainJBrowse
21775at6073Complete361.5188.0aint_s0178.g37.t160S ribosomal protein L18JBrowse
21792at6073Complete509.8337.0aint_s0039.g38.t1transcription factor SOX-9JBrowse
21806at6073Complete488.1310.0aint_s0096.g28.t1protein HEXIM-likeJBrowse
21859at6073Duplicated965.9546.0aint_s0544.g4.t2Bloom syndrome proteinJBrowse
21859at6073Duplicated966.2545.0aint_s0544.g4.t1Bloom syndrome proteinJBrowse
21902at6073Duplicated913.0561.0aint_s0567.g5.t1sorting nexin-30-likeJBrowse
21902at6073Duplicated870.1561.0aint_s0567.g5.t2sorting nexin-30-likeJBrowse
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