BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
14606at6073Duplicated970.8487.0XP_074616104.1uncharacterized protein LOC116289408JBrowse
14606at6073Duplicated970.7487.0XP_074616103.1uncharacterized protein LOC116289408JBrowse
14608at6073Complete671.8302.0XP_074634911.1ras-related GTP-binding protein AJBrowse
14620at6073Complete727.3381.0XP_074626640.1Terminal nucleotidyltransferase 5CJBrowse
14673at6073Duplicated1677.11089.0XP_074630710.1nuclear pore complex protein Nup133-likeJBrowse
14673at6073Duplicated1574.01017.0XP_074630711.1nuclear pore complex protein Nup133-likeJBrowse
14741at6073Complete462.4234.0XP_074634186.1Eukaryotic translation initiation factor 4E type 2JBrowse
14751at6073Complete932.5454.0XP_074632594.1Golgi pH regulator AJBrowse
14768at6073Duplicated753.2508.0XP_074608768.1protein FAM214A-likeJBrowse
14768at6073Duplicated752.8508.0XP_074608756.1protein FAM214A-likeJBrowse
14768at6073Duplicated752.8508.0XP_074608761.1protein FAM214A-likeJBrowse
14781at6073Complete1127.0571.0XP_074623037.160 kDa heat shock protein, mitochondrialJBrowse
14810at6073Complete213.0115.0XP_074608268.160S ribosomal protein L34JBrowse
14816at6073Complete320.4223.0XP_074622001.1kinetochore protein Spc25-likeJBrowse
14845at6073Complete427.0260.0XP_074639875.1Ribosomal RNA-processing protein 7 AJBrowse
14848at6073Complete1690.2958.0XP_074620894.1WD repeat-containing protein 64-likeJBrowse
14896at6073Complete399.3233.0XP_074637571.1lysosomal-associated transmembrane 4A-likeJBrowse
14913at6073Complete436.3218.0XP_074625266.1protein C9orf135JBrowse
14925at6073Complete514.6257.0XP_074639775.160S ribosomal protein L7a-likeJBrowse
14968at6073Duplicated449.8211.0XP_074639330.1B9 domain-containing 1JBrowse
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