BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
14968at6073Duplicated408.8193.0XP_074639331.1B9 domain-containing 1JBrowse
14987at6073Complete627.2384.0XP_074631423.1insulinoma-associated protein 1a-likeJBrowse
15013at6073Complete478.9290.0XP_074613150.1Cyclin-like domainJBrowse
15026at6073Complete707.9393.0XP_074625391.1DUF21 domain-containing protein At4g33700-likeJBrowse
15044at6073Complete718.3355.0XP_074620182.1Isocitrate dehydrogenase JBrowse
15093at6073Complete579.5356.0XP_074639868.1rho GTPase-activating syd-1-likeJBrowse
15136at6073Complete1062.5514.0XP_074606342.1U4/U6 small nuclear ribonucleoprotein Prp4-likeJBrowse
15162at6073Complete191.5108.0XP_074627541.1eukaryotic translation initiation factor 1JBrowse
15222at6073Complete777.8444.0XP_074616105.1GTPase HflX, N-terminalJBrowse
15248at6073Complete457.0221.0XP_074621008.1vesicle-associated membrane protein 7JBrowse
15312at6073Complete240.5135.0XP_074608810.1Mitochondrial intermembrane space import and assembly protein 40JBrowse
15346at6073Complete414.7238.0XP_074615677.1protein C1orf43 homologJBrowse
15348at6073Duplicated278.9166.0XP_074609525.1YY1-associated factor 2JBrowse
15348at6073Duplicated260.6147.0XP_074609526.1YY1-associated factor 2JBrowse
15359at6073Complete411.4219.0XP_074617003.1EKC/KEOPS complex subunit TP53RKJBrowse
15362at6073Duplicated1489.4852.0XP_074607852.1diacylglycerol kinase theta-likeJBrowse
15362at6073Duplicated1489.0852.0XP_074607853.1diacylglycerol kinase theta-likeJBrowse
15362at6073Duplicated1298.0750.0XP_074607855.1diacylglycerol kinase theta-likeJBrowse
15362at6073Duplicated1296.7750.0XP_074607854.1diacylglycerol kinase theta-likeJBrowse
15377at6073Complete937.7556.0XP_074615555.1E3 ubiquitin-protein ligase RNF139-likeJBrowse
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