BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
22409at6073Duplicated1326.0646.0aint_s0017.g47.t1armadillo-like helical domain-containing protein 3JBrowse
22430at6073Complete702.5473.0aint_s0004.g19.t1transmembrane 7 superfamily member 3JBrowse
22479at6073Complete356.8194.0aint_s0077.g6.t1A-kinase anchor protein 14JBrowse
22553at6073Complete739.8462.0aint_s0069.g7.t1cdc42-interacting protein 4JBrowse
22589at6073Duplicated200.4105.0aint_s0376.g5.t1ER membrane protein complex subunit 5JBrowse
22589at6073Duplicated200.4105.0aint_s0376.g5.t2ER membrane protein complex subunit 5JBrowse
22596at6073Complete731.1441.0aint_s0299.g11.t1RNA-binding region-containing protein 3JBrowse
22635at6073Complete607.4294.0aint_s0394.g7.t1coatomer subunit epsilonJBrowse
22643at6073Complete268.9159.0aint_s0272.g50.t1uncharacterized protein LOC116287583JBrowse
22646at6073Complete576.4420.0aint_s0093.g8.t1leucine-rich repeat-containing protein 42JBrowse
22720at6073Fragmented185.5134.0aint_s0203.g7.t1cyclin-dependent kinase 2-interacting proteinJBrowse
22791at6073Duplicated2026.21152.0aint_s0015.g97.t1liprin-alpha-1JBrowse
22791at6073Duplicated1731.5992.0aint_s0015.g97.t2liprin-alpha-1JBrowse
22838at6073Fragmented452.0289.0aint_s0003.g67.t1beclin 1-associated autophagy-related key regulator-likeJBrowse
22845at6073Complete855.0527.0aint_s0219.g15.t1protein GLUTELIN PRECURSOR ACCUMULATION 3 isoform X1JBrowse
22856at6073Complete509.6279.0aint_s0080.g39.t1Transmembrane protein 33JBrowse
22860at6073Complete1191.5645.0aint_s0032.g9.t1zinc finger FYVE domain-containing protein 1JBrowse
22876at6073Fragmented193.5112.0aint_s1022.g3.t1sperm-associated antigen 8JBrowse
22925at6073Complete666.5362.0aint_s0040.g27.t1proliferation-associated protein 2G4JBrowse
22927at6073Complete434.8266.0aint_s0169.g46.t1microtubule-associated protein RP/EB family member 1JBrowse
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