Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.
Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%
| Complete (C = S + D) | Single-copy (S) | Duplicated (D) | Fragmented (F) | Missing (M) |
|---|---|---|---|---|
| 2,355 (73.5%) | 2,287 (71.4%) | 68 (2.1%) | 294 (9.2%) | 554 (17.3%) |
A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.
Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.
| Busco ID | Status | Score | Length | Gene ID | Description | Visualization |
|---|---|---|---|---|---|---|
| 28477at6073 | Complete | 384.3 | 311 | BRAKERHOCP00005001053.1 | Inositol monophosphatase 3 | JBrowse |
| 28525at6073 | Fragmented | 464.6 | 258 | BRAKERHOCP00005004231.1 | Tyrosine-protein phosphatase non-receptor type 1 | JBrowse |
| 28576at6073 | Complete | 285.2 | 263 | BRAKERHOCP00005013933.1 | phosphatidylinositol N-acetylglucosaminyltransferase subunit C-like | JBrowse |
| 28588at6073 | Complete | 1218.1 | 756 | BRAKERHOCP00005009011.1 | endothelin-converting enzyme 2 | JBrowse |
| 28602at6073 | Complete | 785.3 | 684 | BRAKERHOCP00005004000.1 | epidermal growth factor receptor substrate 15-like 1 | JBrowse |
| 28626at6073 | Complete | 962.7 | 847 | BRAKERHOCP00005008167.1 | MAGUK p55 subfamily member 5 | JBrowse |
| 28636at6073 | Complete | 473.8 | 277 | BRAKERHOCP00005001986.1 | Golgi reassembly-stacking protein 2 | JBrowse |
| 28638at6073 | Complete | 259.5 | 307 | BRAKERHOCP00005013326.1 | guanine nucleotide-binding protein subunit beta-like protein 1 | JBrowse |
| 28742at6073 | Complete | 303.4 | 263 | BRAKERHOCP00005003015.1 | tRNA selenocysteine 1-associated protein 1 | JBrowse |
| 28751at6073 | Duplicated | 189.2 | 137 | BRAKERHOCP00005013766.1 | sterile alpha motif domain-containing protein 15-like | JBrowse |
| 28751at6073 | Duplicated | 188.7 | 135 | BRAKERHOCP00005014092.1 | sterile alpha motif domain-containing protein 15-like | JBrowse |
| 28811at6073 | Complete | 431.1 | 363 | BRAKERHOCP00005000003.1 | solute carrier family 25 member 46 | JBrowse |
| 28920at6073 | Complete | 371.3 | 297 | BRAKERHOCP00005008351.1 | nocturnin-like | JBrowse |
| 28963at6073 | Complete | 379.8 | 775 | BRAKERHOCP00005004920.1 | guanine nucleotide exchange protein smcr8a | JBrowse |
| 28964at6073 | Fragmented | 138.6 | 194 | BRAKERHOCP00005017478.1 | sprouty-related, EVH1 domain-containing protein 1-like | JBrowse |
| 29012at6073 | Complete | 869.8 | 745 | BRAKERHOCP00005006103.1 | Origin recognition complex, subunit 1 | JBrowse |
| 29018at6073 | Complete | 664.6 | 476 | BRAKERHOCP00005004887.1 | lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex | JBrowse |
| 29042at6073 | Complete | 835.4 | 748 | BRAKERHOCP00005008756.1 | la-related protein 1B-like | JBrowse |
| 29101at6073 | Complete | 220.5 | 133 | BRAKERHOCP00005015572.1 | ubiquitin-like protein FUBI | JBrowse |
| 29182at6073 | Duplicated | 1145.1 | 693 | BRAKERHOCP00005006660.1 | adenylate kinase 7 | JBrowse |