BUSCO Gene Details in Paramuricea clavata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Paramuricea clavataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.5% [S: 64.6%, D: 13.9%] F: 17.4%, M: 4.1%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,513 (78.5%)2,069 (64.6%)444 (13.9%)558 (17.4%)132 (4.1%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Paramuricea clavata: 3,572 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
21070at6073Fragmented336.4247.0CAB3997325.1abscission/NoCut checkpoint regulator-likeJBrowse
21124at6073Fragmented348.0238.0CAB4014703.1Synapse-associated protein 1JBrowse
21179at6073Complete262.0169.0CAB4005344.1uncharacterized protein LOC116291792JBrowse
21180at6073Duplicated2111.61297.0CAB3995418.1uncharacterized protein LOC131795997 isoform X1JBrowse
21180at6073Duplicated2110.01297.0CAB3995417.1uncharacterized protein LOC131795997 isoform X1JBrowse
21247at6073Complete427.9237.0CAB4024695.1phosducin 3JBrowse
21278at6073Duplicated484.0297.0CAB4007215.1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1JBrowse
21278at6073Duplicated473.2278.0CAB4007216.1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1JBrowse
21315at6073Complete266.5209.0CAB3984723.1calcyclin-binding proteinJBrowse
21340at6073Complete813.6596.0CAB4008497.1probable serine incorporatorJBrowse
21345at6073Complete514.0308.0CAB4027363.1Golgi to ER traffic protein 4JBrowse
21357at6073Duplicated408.0249.0CAB3981710.1signal recognition particle receptor subunit betaJBrowse
21357at6073Duplicated407.3248.0CAB3981711.1signal recognition particle receptor subunit betaJBrowse
21426at6073Duplicated779.5383.0CAB4006915.1beta-ureidopropionase-likeJBrowse
21426at6073Duplicated731.3367.0CAB4006916.1beta-ureidopropionase-likeJBrowse
21445at6073Complete693.3391.0CAB4001185.1Heat shock protein DnaJ, cysteine-rich domainJBrowse
21446at6073Duplicated568.1315.0CAB3997706.13-hydroxyisobutyrate dehydrogenase, mitochondrial-likeJBrowse
21446at6073Duplicated530.7285.0CAB3997707.13-hydroxyisobutyrate dehydrogenase, mitochondrial-likeJBrowse
21585at6073Duplicated1223.9727.0CAB3988765.1armadillo repeat-containing protein 3JBrowse
21585at6073Duplicated1183.8705.0CAB3988766.1armadillo repeat-containing protein 3JBrowse
Go to page: of 179 pages
TOP