BUSCO Gene Details in Stephanocoenia intersepta

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Stephanocoenia interseptaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 90.4% [S: 53.0%, D: 37.4%] F: 6.2%, M: 3.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,896 (90.4%)1,697 (53.0%)1,199 (37.4%)198 (6.2%)109 (3.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Stephanocoenia intersepta: 4,692 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
15596at6073Duplicated776.8501.0ENSDDJP00000006394.1G patch domain-containing protein 3JBrowse
15596at6073Duplicated782.4496.0ENSDDJP00000006400.1G patch domain-containing protein 3JBrowse
15604at6073Complete544.3384.0ENSDDJP00000040715.1sprT-like domain-containing protein SpartanJBrowse
15702at6073Duplicated990.3467.0ENSDDJP00000030888.1Acid-sensing ion channel 2JBrowse
15702at6073Duplicated926.3455.0ENSDDJP00000030880.1Acid-sensing ion channel 2JBrowse
15702at6073Duplicated958.7452.0ENSDDJP00000030904.1Acid-sensing ion channel 2JBrowse
15713at6073Duplicated281.3189.0ENSDDJP00000033558.1mitotic spindle assembly checkpoint protein MAD2B-likeJBrowse
15713at6073Duplicated280.1186.0ENSDDJP00000033571.1mitotic spindle assembly checkpoint protein MAD2B-likeJBrowse
15834at6073Complete486.8303.0ENSDDJP00000016513.1ubiquitin-conjugating enzyme E2 U-likeJBrowse
15842at6073Duplicated1212.0639.0ENSDDJP00000016607.1cAMP-specific 3',5'-cyclic phosphodiesterase 4C-likeJBrowse
15842at6073Duplicated1206.9639.0ENSDDJP00000016593.1cAMP-specific 3',5'-cyclic phosphodiesterase 4C-likeJBrowse
15842at6073Duplicated1082.8567.0ENSDDJP00000016565.1cAMP-specific 3',5'-cyclic phosphodiesterase 4C-likeJBrowse
15844at6073Duplicated836.5479.0ENSDDJP00000035807.1uncharacterized protein LOC110233383 isoform X1JBrowse
15844at6073Duplicated891.0471.0ENSDDJP00000039120.1uncharacterized protein LOC110233383 isoform X1JBrowse
15944at6073Complete739.0348.0ENSDDJP00000009530.1cyclin-dependent kinase 20JBrowse
15948at6073Complete1270.7706.0ENSDDJP00000007025.1leucine-rich repeat and guanylate kinase domain-containing proteinJBrowse
15954at6073Complete266.1173.0ENSDDJP00000016051.1BLOC-1-related complex subunit 5JBrowse
15990at6073Complete666.1357.0ENSDDJP00000013938.1RNA 3 -terminal phosphate cyclaseJBrowse
16004at6073Duplicated1751.4999.0ENSDDJP00000014987.1nuclear pore complex protein Nup107-likeJBrowse
16004at6073Duplicated1519.1914.0ENSDDJP00000014967.1nuclear pore complex protein Nup107-likeJBrowse
Go to page: of 235 pages
TOP