BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
22932at6073Complete1062.1532.0aint_s0316.g5.t1kelch-like protein diabloJBrowse
22956at6073Complete681.3321.0aint_s0033.g91.t1succinate--CoA ligase JBrowse
22987at6073Complete517.2294.0aint_s0195.g16.t1trace amine-associated receptor 7f-likeJBrowse
23032at6073Complete552.9300.0aint_s0031.g39.t1homeobox protein orthopedia-likeJBrowse
23077at6073Duplicated161.7124.0aint_s0382.g34.t1spermatogenesis-associated protein 22JBrowse
23077at6073Duplicated160.9124.0aint_s0382.g34.t2spermatogenesis-associated protein 22JBrowse
23077at6073Duplicated154.9124.0aint_s0382.g34.t3spermatogenesis-associated protein 22JBrowse
23105at6073Complete715.8418.0aint_s0015.g91.t1sorting and assembly machinery component 50JBrowse
23196at6073Complete295.1195.0aint_s0874.g2.t1phosphatidylinositol-glycan biosynthesis class F protein-likeJBrowse
23215at6073Complete833.7415.0aint_s0191.g12.t1Acetyl-CoA acetyltransferase A, mitochondrialJBrowse
23245at6073Complete1123.8593.0aint_s0073.g51.t1uncharacterized protein LOC111340008JBrowse
23248at6073Complete1334.4748.0aint_s0070.g17.t1ankyrin repeat and MYND domain-containing protein 1JBrowse
23253at6073Duplicated487.6322.0aint_s0013.g71.t139S ribosomal protein L37, mitochondrial-likeJBrowse
23253at6073Duplicated487.0322.0aint_s1014.g2.t139S ribosomal protein L37, mitochondrial-likeJBrowse
23272at6073Complete803.9475.0aint_s0174.g14.t1potassium voltage-gated channel subfamily C member 1-likeJBrowse
23276at6073Fragmented496.2250.0aint_s0022.g103.t1endophilin-B1-likeJBrowse
23304at6073Complete633.0378.0aint_s0322.g7.t1Dual specificity protein phosphatase 1JBrowse
23362at6073Complete289.9169.0aint_s0047.g43.t1cytochrome b-245 light chainJBrowse
23434at6073Complete318.9236.0aint_s0194.g22.t1endosome-associated-trafficking regulator 1JBrowse
23466at6073Complete756.1462.0aint_s0101.g48.t1cytochrome b-c1 complex subunit 2, mitochondrialJBrowse
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