BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
23506at6073Duplicated1187.0785.0alor_g12591.t1INO80 complex subunit DJBrowse
23534at6073Complete1226.5674.0alor_g4566.t1leucine-rich repeat-containing protein 49JBrowse
23558at6073Complete242.1134.0alor_g21768.t1achaete-scute homolog 4JBrowse
23567at6073Complete897.6495.0alor_g24201.t1Sorting nexin-2JBrowse
23599at6073Duplicated1168.2606.0alor_g22206.t1Polyadenylate-binding protein 4JBrowse
23599at6073Duplicated1071.8603.0alor_g22211.t1Polyadenylate-binding protein 4JBrowse
23599at6073Duplicated994.3527.0alor_g22212.t1Polyadenylate-binding protein 4JBrowse
23600at6073Complete840.6435.0alor_g6711.t1protein GDAP2 homologJBrowse
23632at6073Duplicated146.282.0alor_g14502.t1ribonuclease kappa-B-likeJBrowse
23632at6073Duplicated146.282.0alor_g14502.t2ribonuclease kappa-B-likeJBrowse
23632at6073Duplicated146.282.0alor_g14502.t3ribonuclease kappa-B-likeJBrowse
23689at6073Complete316.4160.0alor_g23955.t1charged multivesicular body protein 1bJBrowse
23809at6073Complete1969.51108.0alor_g3631.t1probable ATP-dependent RNA helicase DHX37JBrowse
23852at6073Complete1015.8502.0alor_g4063.t1coatomer subunit deltaJBrowse
23930at6073Complete498.9289.0alor_g22712.t1histone-lysine N-methyltransferase SUV39H2JBrowse
23956at6073Complete809.6465.0alor_g13371.t1protein-serine O-palmitoleoyltransferase porcupine-likeJBrowse
23958at6073Complete1230.9769.0alor_g25686.t1Kinase suppressor of Ras 1JBrowse
23992at6073Complete693.5391.0alor_g6957.t1CTD small phosphatase-like protein 2JBrowse
23993at6073Complete1197.3664.0alor_g25159.t1striatinJBrowse
24078at6073Complete263.3164.0alor_g7320.t1glycine cleavage system H proteinJBrowse
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