BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
15844at6073Complete883.3479.0XP_074631778.1uncharacterized protein LOC110233383 isoform X1JBrowse
15944at6073Complete737.4348.0XP_074608827.1cyclin-dependent kinase 20JBrowse
15948at6073Complete1281.5758.0XP_074610307.1leucine-rich repeat and guanylate kinase domain-containing proteinJBrowse
15954at6073Complete256.3174.0XP_074613169.1BLOC-1-related complex subunit 5JBrowse
15990at6073Complete651.6356.0XP_074611153.1RNA 3 -terminal phosphate cyclaseJBrowse
16004at6073Duplicated1624.9952.0XP_074615425.1nuclear pore complex protein Nup107-likeJBrowse
16004at6073Duplicated1624.9952.0XP_074615426.1nuclear pore complex protein Nup107-likeJBrowse
16004at6073Duplicated1624.9952.0XP_074615428.1nuclear pore complex protein Nup107-likeJBrowse
16052at6073Duplicated580.0506.0XP_074620803.1uncharacterized protein LOC116304310 isoform X1JBrowse
16052at6073Duplicated578.5506.0XP_074620802.1uncharacterized protein LOC116304310 isoform X1JBrowse
16097at6073Complete567.6336.0XP_074631557.1aldose 1-epimeraseJBrowse
16115at6073Complete1355.6706.0XP_074626556.1ATP-binding cassette sub-family B member 7, mitochondrialJBrowse
16189at6073Complete1528.2776.0XP_074619128.1E3 ubiquitin-protein ligase trim71JBrowse
16197at6073Complete1050.5798.0XP_074618364.1anillinJBrowse
16222at6073Complete243.7142.0XP_074614029.1protein FAM136AJBrowse
16272at6073Duplicated822.5470.0XP_074625933.1lysophospholipid acyltransferase 5-likeJBrowse
16272at6073Duplicated726.4436.0XP_074625934.1lysophospholipid acyltransferase 5-likeJBrowse
16272at6073Duplicated724.5414.0XP_074625935.1lysophospholipid acyltransferase 5-likeJBrowse
16274at6073Complete423.2224.0XP_074626901.1uracil phosphoribosyltransferase homologJBrowse
16289at6073Complete657.1441.0XP_074628312.1hyccin-likeJBrowse
Go to page: of 238 pages
TOP