BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
26409at6073Complete448.5368.0HOLI00033.G48172Ancient ubiquitous protein 1JBrowse
26507at6073Fragmented174.5102.0HOLI00156.G47468N-alpha-acetyltransferase 40JBrowse
26595at6073Complete940.3645.0HOLI00760.G3789nicastrin-likeJBrowse
26600at6073Fragmented401.8374.0HOLI02111.G29370E3 ubiquitin-protein ligase RNF8-likeJBrowse
26635at6073Complete396.7210.0HOLI00562.G42656Charged multivesicular body protein 5JBrowse
26695at6073Complete353.8270.0HOLI01257.G236solute carrier family 35 member C2-likeJBrowse
26707at6073Complete639.0386.0HOLI01893.G57371glycoprotein endo-alpha-1,2-mannosidaseJBrowse
26737at6073Complete954.6975.0HOLI00341.G43900unconventional myosin-Id-likeJBrowse
26747at6073Complete511.4600.0HOLI00074.G28925nibrinJBrowse
26812at6073Complete166.9161.0HOLI04068.G29525tyrosine-protein kinase BTKJBrowse
26824at6073Complete984.6645.0HOLI00351.G23745Signal recognition particle subunit SRP72JBrowse
26832at6073Duplicated302.6224.0HOLI02199.G59975peroxisomal membrane protein 11AJBrowse
26832at6073Duplicated293.9219.0HOLI01782.G29038peroxisomal membrane protein 11AJBrowse
26841at6073Complete647.9435.0HOLI04013.G55739cytoplasmic dynein 1 light intermediate chain 1JBrowse
26931at6073Complete1276.6876.0HOLI00217.G8139helicase ARIP4-likeJBrowse
26953at6073Complete374.0212.0HOLI01030.G33429RNA-binding protein pno1JBrowse
27021at6073Complete424.5278.0HOLI00130.G5151mortality factor 4 1JBrowse
27031at6073Fragmented516.3378.0HOLI00019.G42023amyloid-beta A4 protein-likeJBrowse
27051at6073Complete255.6239.0HOLI00572.G1742coiled-coil domain-containing protein 97JBrowse
27097at6073Complete375.6267.0HOLI00043.G456OTU domain-containing protein 6B-likeJBrowse
Go to page: of 152 pages
TOP