BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
23491at6073Complete716.2385.0aint_s0174.g16.t2armadillo-like helical domain containing protein 1JBrowse
23504at6073Complete844.6314.0aint_s0271.g32.t2erlin-2-BJBrowse
23506at6073Duplicated1200.4800.0aint_s0113.g2.t2INO80 complex subunit DJBrowse
23506at6073Duplicated1199.5800.0aint_s0113.g2.t3INO80 complex subunit DJBrowse
23506at6073Duplicated1167.4770.0aint_s0113.g2.t1INO80 complex subunit DJBrowse
23534at6073Complete1316.3752.0aint_s0059.g32.t1leucine-rich repeat-containing protein 49JBrowse
23558at6073Complete242.1134.0aint_s0184.g71.t1achaete-scute homolog 4JBrowse
23567at6073Complete899.3495.0aint_s0043.g39.t1Sorting nexin-2JBrowse
23599at6073Complete1164.8605.0aint_s0480.g11.t1Polyadenylate-binding protein 4JBrowse
23600at6073Fragmented676.6339.0aint_s0009.g16.t1protein GDAP2 homologJBrowse
23632at6073Duplicated142.282.0aint_s0500.g5.t2ribonuclease kappa-B-likeJBrowse
23632at6073Duplicated142.282.0aint_s0500.g5.t3ribonuclease kappa-B-likeJBrowse
23632at6073Duplicated142.182.0aint_s0500.g5.t1ribonuclease kappa-B-likeJBrowse
23809at6073Complete1967.61108.0aint_s0029.g20.t1probable ATP-dependent RNA helicase DHX37JBrowse
23852at6073Complete1009.5502.0aint_s0376.g2.t1coatomer subunit deltaJBrowse
23930at6073Complete499.6289.0aint_s0154.g20.t1histone-lysine N-methyltransferase SUV39H2JBrowse
23956at6073Duplicated808.9465.0aint_s0283.g8.t2protein-serine O-palmitoleoyltransferase porcupine-likeJBrowse
23956at6073Duplicated808.9465.0aint_s0283.g8.t3protein-serine O-palmitoleoyltransferase porcupine-likeJBrowse
23958at6073Fragmented859.4595.0aint_s0023.g21.t2Kinase suppressor of Ras 1JBrowse
23992at6073Complete693.6391.0aint_s0010.g139.t1CTD small phosphatase-like protein 2JBrowse
Go to page: of 170 pages
TOP