BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
24120at6073Complete654.1316.0alor_g7135.t1Ubiquitin-like-conjugating enzyme ATG3JBrowse
24152at6073Fragmented497.1318.0alor_g15074.t1mitochondrial sodium/calcium exchanger protein-likeJBrowse
24204at6073Complete496.2253.0alor_g21135.t13-hydroxyacyl-CoA dehydrogenase type-2JBrowse
24205at6073Complete267.1168.0alor_g27084.t1tetratricopeptide repeat protein 9CJBrowse
24207at6073Complete990.7658.0alor_g26463.t1TRAF3-interacting protein 1JBrowse
24219at6073Complete300.6173.0alor_g11084.t1AN1-type zinc finger protein 6JBrowse
24222at6073Fragmented186.1111.0alor_g26491.t1Protein canopy 3JBrowse
24233at6073Complete598.6282.0alor_g24456.t1cell cycle checkpoint protein RAD1JBrowse
24238at6073Complete394.7237.0alor_g21406.t1ATP synthase F(0) complex subunit B1, mitochondrialJBrowse
24250at6073Complete630.0353.0alor_g16908.t1Ankyrin repeat domain-containing protein 13CJBrowse
24260at6073Complete867.7604.0alor_g20588.t1eEF1A lysine and N-terminal methyltransferaseJBrowse
24278at6073Complete291.6220.0alor_g18404.t1MAD2L1-binding proteinJBrowse
24302at6073Complete253.8158.0alor_g8052.t1pleckstrin homology domain-containing family A member 1 isoform X1JBrowse
24322at6073Complete259.1172.0alor_g15294.t1transcription factor -likeJBrowse
24327at6073Complete1547.4867.0alor_g16148.t1formin-like proteinJBrowse
24336at6073Complete891.5471.0alor_g21217.t1tubulin delta chain-likeJBrowse
24416at6073Complete468.2245.0alor_g10484.t1syntaxin-6JBrowse
24429at6073Complete171.181.0alor_g26469.t1costars family protein ABRACLJBrowse
24443at6073Complete750.1391.0alor_g2687.t1WD repeat domain phosphoinositide-interacting protein 2JBrowse
24533at6073Complete419.6249.0alor_g9796.t1probable U3 small nucleolar RNA-associated protein 11JBrowse
Go to page: of 167 pages
TOP