BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
16329at6073Complete980.2607.0XP_074606012.1protein FAM227A-likeJBrowse
16359at6073Complete312.1189.0XP_074608731.1spermatogenesis-associated protein 24JBrowse
16385at6073Duplicated189.7204.0XP_074605850.1uncharacterized protein LOC111325656 isoform X1JBrowse
16385at6073Duplicated167.3204.0XP_074605844.1uncharacterized protein LOC111325656 isoform X1JBrowse
16397at6073Complete199.5114.0XP_074606673.1cytochrome b-c1 complex subunit 7JBrowse
16411at6073Complete809.3675.0XP_074608994.1zinc finger protein 208JBrowse
16457at6073Complete544.4278.0XP_074617643.1exosome complex exonuclease RRP42-likeJBrowse
16462at6073Duplicated794.7452.0XP_074629164.1cyclin-dependent kinase 14-likeJBrowse
16462at6073Duplicated736.3379.0XP_074629165.1cyclin-dependent kinase 14-likeJBrowse
16511at6073Duplicated621.9346.0XP_074629276.1insulin gene enhancer protein ISL-1-likeJBrowse
16511at6073Duplicated621.9346.0XP_074629279.1insulin gene enhancer protein ISL-1-likeJBrowse
16511at6073Duplicated621.9346.0XP_074629286.1insulin gene enhancer protein ISL-1-likeJBrowse
16511at6073Duplicated621.9346.0XP_074629293.1insulin gene enhancer protein ISL-1-likeJBrowse
16511at6073Duplicated616.7340.0XP_074629303.1insulin gene enhancer protein ISL-1-likeJBrowse
16511at6073Duplicated615.3339.0XP_074629311.1insulin gene enhancer protein ISL-1-likeJBrowse
16531at6073Complete319.2275.0XP_074632069.1fasciculation and elongation protein zeta-2-likeJBrowse
16533at6073Complete564.0300.0XP_074612254.1Ribosome production factor 1JBrowse
16538at6073Complete253.3140.0XP_074629930.1glia maturation factor beta-likeJBrowse
16561at6073Complete1716.8831.0XP_074624891.1intraflagellar transport protein 88 homologJBrowse
16570at6073Complete176.8106.0XP_074638679.1glutaredoxin-like protein C5orf63 homologJBrowse
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