BUSCO Gene Details in Acropora hemprichii

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora hemprichiiBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 75.3% [S: 72.1%, D: 3.3%] F: 15.5%, M: 9.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,413 (75.3%)2,308 (72.1%)105 (3.3%)495 (15.5%)295 (9.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora hemprichii: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
1880at6073Complete870.6458.0Ahemp_005876-T1GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferaseJBrowse
1920at6073Duplicated244.6286.0Ahemp_000718-T1kidney mitochondrial carrier protein 1JBrowse
1920at6073Duplicated246.8272.0Ahemp_012039-T1kidney mitochondrial carrier protein 1JBrowse
1920at6073Duplicated250.0247.0Ahemp_002671-T1kidney mitochondrial carrier protein 1JBrowse
1944at6073Complete679.7346.0Ahemp_006494-T1mitogen-activated protein kinase 14JBrowse
2020at6073Complete372.2207.0Ahemp_015439-T1DNA replication complex GINS protein PSF3-likeJBrowse
2051at6073Fragmented681.9357.0Ahemp_003003-T1Fucose-1-phosphate guanylyltransferaseJBrowse
2052at6073Complete378.8196.0Ahemp_017847-T1mitochondrial inner membrane protease ATP23JBrowse
2062at6073Complete490.6310.0Ahemp_015206-T1transcription factor Sox-3JBrowse
2093at6073Fragmented497.0273.0Ahemp_015081-T1protein O-glucosyltransferase 2JBrowse
2095at6073Complete1287.2610.0Ahemp_010050-T1bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthaseJBrowse
2197at6073Complete525.6312.0Ahemp_001457-T1protein FAM228BJBrowse
2225at6073Complete345.9184.0Ahemp_003481-T1protein Hikeshi-likeJBrowse
2262at6073Complete318.8146.0Ahemp_006770-T1Retinal rod rhodopsin-sensitive cGMP 3, 5 -cyclic phosphodiesterase subunit deltaJBrowse
2281at6073Complete263.6178.0Ahemp_013067-T1Dynein heavy chain AAA lid domainJBrowse
2305at6073Complete494.2240.0Ahemp_007663-T1vacuolar-sorting protein SNF8JBrowse
2333at6073Complete721.2425.0Ahemp_003283-T1carbohydrate sulfotransferase 1JBrowse
2340at6073Complete720.6375.0Ahemp_008115-T1Endoplasmic reticulum-Golgi intermediate compartment protein 2JBrowse
2378at6073Complete233.0105.0Ahemp_014096-T1RING-box protein 1JBrowse
2385at6073Complete412.3244.0Ahemp_017982-T1polyhomeotic-like protein 2JBrowse
Go to page: of 152 pages
TOP