BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
1790at6073Complete298.0222.0aint_s0415.g27.t1short stature homeobox proteinJBrowse
1838at6073Complete371.5194.0aint_s0252.g9.t1SPRY domain-containing protein 7JBrowse
1859at6073Complete280.7166.0aint_s0101.g84.t1uncharacterized protein C16orf52 homologJBrowse
1880at6073Complete870.7458.0aint_s0347.g20.t1GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferaseJBrowse
1920at6073Complete551.4293.0aint_s0300.g20.t1kidney mitochondrial carrier protein 1JBrowse
1944at6073Fragmented514.6230.0aint_s0529.g5.t1mitogen-activated protein kinase 14JBrowse
1962at6073Complete152.891.0aint_s0019.g79.t1SH3 domain-binding glutamic acid-rich 3JBrowse
2020at6073Complete376.4207.0aint_s0105.g19.t1DNA replication complex GINS protein PSF3-likeJBrowse
2036at6073Complete201.991.0aint_s0271.g4.t1small nuclear ribonucleoprotein EJBrowse
2051at6073Complete967.2560.0aint_s0004.g96.t1Fucose-1-phosphate guanylyltransferaseJBrowse
2052at6073Complete377.1196.0aint_s0124.g17.t1mitochondrial inner membrane protease ATP23JBrowse
2062at6073Complete490.6310.0aint_s0050.g33.t1transcription factor Sox-3JBrowse
2093at6073Complete949.3482.0aint_s0140.g2.t1protein O-glucosyltransferase 2JBrowse
2095at6073Duplicated1284.1610.0aint_s0012.g65.t2bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthaseJBrowse
2095at6073Duplicated1285.2609.0aint_s0012.g65.t1bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthaseJBrowse
2197at6073Complete526.8312.0aint_s0001.g34.t1protein FAM228BJBrowse
2201at6073Duplicated630.5459.0aint_s0234.g6.t1vesicular glutamate transporter 2JBrowse
2201at6073Duplicated634.0452.0aint_s0234.g7.t1vesicular glutamate transporter 2JBrowse
2225at6073Duplicated365.9193.0aint_s0074.g4.t1protein Hikeshi-likeJBrowse
2225at6073Duplicated360.3193.0aint_s0074.g4.t2protein Hikeshi-likeJBrowse
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