BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
1240at6073Duplicated596.5466.0XP_074622803.1uncharacterized protein LOC110041196 isoform X1JBrowse
1244at6073Complete785.1426.0XP_074617091.1DENN domain-containing protein 11-likeJBrowse
1254at6073Complete259.9160.0XP_074633462.1succinate dehydrogenase JBrowse
1267at6073Duplicated859.6409.0XP_074635717.1histone acetyltransferase KAT8-likeJBrowse
1267at6073Duplicated859.6409.0XP_074635718.1histone acetyltransferase KAT8-likeJBrowse
1341at6073Complete493.5216.0XP_074639202.1Ras-related protein Rab-14JBrowse
1342at6073Complete378.4191.0XP_074613470.1protein N-terminal glutamine amidohydrolaseJBrowse
1358at6073Complete908.7393.0XP_074632075.1actin-related protein 2JBrowse
1360at6073Complete234.4135.0XP_074621950.1NTF2-related export protein 1JBrowse
1361at6073Duplicated581.7316.0XP_074607824.1potassium channel subfamily K member 9JBrowse
1361at6073Duplicated581.7316.0XP_074607825.1potassium channel subfamily K member 9JBrowse
1361at6073Duplicated581.7316.0XP_074607826.1potassium channel subfamily K member 9JBrowse
1370at6073Duplicated570.9279.0XP_074629378.1homeobox protein six1-likeJBrowse
1370at6073Duplicated570.9279.0XP_074629379.1homeobox protein six1-likeJBrowse
1370at6073Duplicated570.9279.0XP_074629380.1homeobox protein six1-likeJBrowse
1370at6073Duplicated570.9279.0XP_074629381.1homeobox protein six1-likeJBrowse
1370at6073Duplicated570.9279.0XP_074629382.1homeobox protein six1-likeJBrowse
1370at6073Duplicated570.9279.0XP_074629383.1homeobox protein six1-likeJBrowse
1370at6073Duplicated570.9279.0XP_074629384.1homeobox protein six1-likeJBrowse
1370at6073Duplicated570.9279.0XP_074629385.1homeobox protein six1-likeJBrowse
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