BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
1859at6073Complete281.9166.0FUN_038000-T1uncharacterized protein C16orf52 homologJBrowse
1880at6073Complete872.0458.0FUN_007171-T1GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferaseJBrowse
1920at6073Complete549.0293.0FUN_041658-T1kidney mitochondrial carrier protein 1JBrowse
1944at6073Fragmented514.5230.0FUN_028838-T1mitogen-activated protein kinase 14JBrowse
1962at6073Complete151.691.0FUN_012192-T1SH3 domain-binding glutamic acid-rich 3JBrowse
2020at6073Complete376.4207.0FUN_035070-T1DNA replication complex GINS protein PSF3-likeJBrowse
2036at6073Complete201.991.0FUN_001115-T1small nuclear ribonucleoprotein EJBrowse
2051at6073Complete977.1560.0FUN_007696-T1Fucose-1-phosphate guanylyltransferaseJBrowse
2052at6073Complete378.9196.0FUN_006004-T1mitochondrial inner membrane protease ATP23JBrowse
2062at6073Complete480.7294.0FUN_041481-T1transcription factor Sox-3JBrowse
2093at6073Duplicated955.7489.0FUN_040962-T1protein O-glucosyltransferase 2JBrowse
2093at6073Duplicated953.0489.0FUN_036519-T2protein O-glucosyltransferase 2JBrowse
2093at6073Duplicated952.1487.0FUN_036519-T4protein O-glucosyltransferase 2JBrowse
2095at6073Complete1288.2610.0FUN_036879-T1bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthaseJBrowse
2197at6073Complete526.9312.0FUN_012481-T1protein FAM228BJBrowse
2201at6073Complete921.6464.0FUN_023790-T1vesicular glutamate transporter 2JBrowse
2225at6073Complete364.6193.0FUN_037517-T1protein Hikeshi-likeJBrowse
2251at6073Complete407.2249.0FUN_000544-T1protein AMN1 homologJBrowse
2255at6073Complete1260.6578.0FUN_045821-T1Kelch repeat type 1JBrowse
2262at6073Complete318.8146.0FUN_025309-T1Retinal rod rhodopsin-sensitive cGMP 3, 5 -cyclic phosphodiesterase subunit deltaJBrowse
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