BUSCO Gene Details in Montipora cactus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Montipora cactusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 74.1% [S: 70.8%, D: 3.3%] F: 15.7%, M: 10.1%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,375 (74.1%)2,268 (70.8%)107 (3.3%)504 (15.7%)324 (10.1%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Montipora cactus: 2,989 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2020at6073Complete380.5207BRAKERNUSP00000036911.1DNA replication complex GINS protein PSF3-likeJBrowse
2036at6073Fragmented104.854BRAKERNUSP00000033402.1small nuclear ribonucleoprotein EJBrowse
2051at6073Fragmented596.8354BRAKERNUSP00000026840.1Fucose-1-phosphate guanylyltransferaseJBrowse
2052at6073Complete372.2195BRAKERNUSP00000028471.1mitochondrial inner membrane protease ATP23JBrowse
2062at6073Complete488.1309BRAKERNUSP00000024991.1transcription factor Sox-3JBrowse
2093at6073Complete887.7449BRAKERNUSP00000029024.1protein O-glucosyltransferase 2JBrowse
2095at6073Complete1180.0555BRAKERNUSP00000036059.1bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthaseJBrowse
2197at6073Complete521.2312BRAKERNUSP00000006665.1protein FAM228BJBrowse
2225at6073Complete362.8193BRAKERNUSP00000022140.1protein Hikeshi-likeJBrowse
2251at6073Fragmented300.2192BRAKERNUSP00000053146.1protein AMN1 homologJBrowse
2262at6073Complete288.7131BRAKERNUSP00000014484.1Retinal rod rhodopsin-sensitive cGMP 3, 5 -cyclic phosphodiesterase subunit deltaJBrowse
2281at6073Complete264.7178BRAKERNUSP00000013946.1Dynein heavy chain AAA lid domainJBrowse
2297at6073Complete933.5430BRAKERNUSP00000043100.1adenosylhomocysteinase AJBrowse
2305at6073Complete486.9241BRAKERNUSP00000029333.1vacuolar-sorting protein SNF8JBrowse
2340at6073Fragmented452.4252BRAKERNUSP00000043529.1Endoplasmic reticulum-Golgi intermediate compartment protein 2JBrowse
2385at6073Complete478.4282BRAKERNUSP00000003729.1polyhomeotic-like protein 2JBrowse
2440at6073Complete365.5213BRAKERNUSP00000020483.1uncharacterized protein LOC116287038JBrowse
2501at6073Complete264.0117BRAKERNUSP00000014632.1Gamma-aminobutyric acid receptor-associated -like 2JBrowse
2559at6073Fragmented461.6228BRAKERNUSP00000007117.1BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3JBrowse
2568at6073Complete1149.3602BRAKERNUSP00000008378.1serine/threonine-protein kinase PLK1JBrowse
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