BUSCO Gene Details in Orbicella faveolata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Orbicella faveolataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.6% [S: 72.7%, D: 16.8%] F: 8.5%, M: 1.9%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,869 (89.6%)2,330 (72.7%)539 (16.8%)273 (8.5%)61 (1.9%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Orbicella faveolata: 3,961 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
1370at6073Duplicated561.7279.0XP_020605723.1homeobox protein six1-likeJBrowse
1370at6073Duplicated561.7279.0XP_020605724.1homeobox protein six1-likeJBrowse
1370at6073Duplicated560.7279.0XP_020605725.1homeobox protein six1-likeJBrowse
1408at6073Complete264.6173.0XP_020602696.1dnaJ homolog subfamily C member 12-likeJBrowse
1411at6073Complete632.0351.0XP_020622408.11-acyl-sn-glycerol-3-phosphate acyltransferase epsilonJBrowse
1419at6073Complete736.9355.0XP_020620416.1protein arginine N-methyltransferase 1JBrowse
1422at6073Complete1167.4607.0XP_020623976.1Integrator complex subunit 11JBrowse
1440at6073Complete439.2239.0XP_020601003.1cyanocobalamin reductase / alkylcobalamin dealkylaseJBrowse
1457at6073Complete731.4402.0XP_020607461.1ceramide glucosyltransferaseJBrowse
1484at6073Complete458.3219.0XP_020619608.1cleavage and polyadenylation specificity factor subunit 5JBrowse
1491at6073Duplicated617.2331.0XP_020601113.1cell cycle control protein 50A-likeJBrowse
1491at6073Duplicated617.1331.0XP_020601112.1cell cycle control protein 50A-likeJBrowse
1580at6073Complete436.1299.0XP_020632934.1dual specificity mitogen-activated protein kinase kinase 4JBrowse
1599at6073Complete697.9338.0XP_020614609.1WD repeat domain phosphoinositide-interacting protein 4JBrowse
1619at6073Complete240.3114.0XP_020616731.1transcription elongation factor SPT4JBrowse
1622at6073Complete822.9418.0XP_020632179.1mannose-1-phosphate guanyltransferase alphaJBrowse
1627at6073Duplicated482.3273.0XP_020628863.1tubulin polyglutamylase complex subunit 2JBrowse
1627at6073Duplicated468.0273.0XP_020628862.1tubulin polyglutamylase complex subunit 2JBrowse
1630at6073Duplicated682.1394.0XP_020617940.1DNA excision repair protein ERCC-8JBrowse
1630at6073Duplicated681.8394.0XP_020617888.1DNA excision repair protein ERCC-8JBrowse
Go to page: of 199 pages
TOP