BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
1204at6073Duplicated252.8141.0ENSORFP00005016442.1trafficking protein particle complex subunit 1JBrowse
1219at6073Duplicated775.1360.0ENSORFP00005041469.1COUP transcription factor 2-likeJBrowse
1219at6073Duplicated774.4360.0ENSORFP00005051751.1COUP transcription factor 2-likeJBrowse
1219at6073Duplicated768.0360.0ENSORFP00005041463.1COUP transcription factor 2-likeJBrowse
1219at6073Duplicated767.3360.0ENSORFP00005019847.1COUP transcription factor 2-likeJBrowse
1219at6073Duplicated720.1357.0ENSORFP00005041450.1COUP transcription factor 2-likeJBrowse
1244at6073Complete776.4426.0ENSORFP00005020638.1DENN domain-containing protein 11-likeJBrowse
1254at6073Complete260.6160.0ENSORFP00005027875.1succinate dehydrogenase JBrowse
1267at6073Complete854.4412.0ENSORFP00005017512.1histone acetyltransferase KAT8-likeJBrowse
1341at6073Complete493.4216.0ENSORFP00005000792.1Ras-related protein Rab-14JBrowse
1342at6073Duplicated367.4192.0ENSORFP00005004529.1protein N-terminal glutamine amidohydrolaseJBrowse
1342at6073Duplicated314.4160.0ENSORFP00005037153.1protein N-terminal glutamine amidohydrolaseJBrowse
1358at6073Complete712.8387.0ENSORFP00005024598.1actin-related protein 2JBrowse
1360at6073Duplicated221.2135.0ENSORFP00005021454.1NTF2-related export protein 1JBrowse
1360at6073Duplicated216.8132.0ENSORFP00005021444.1NTF2-related export protein 1JBrowse
1360at6073Duplicated198.4119.0ENSORFP00005021434.1NTF2-related export protein 1JBrowse
1361at6073Complete555.4316.0ENSORFP00005003679.1potassium channel subfamily K member 9JBrowse
1370at6073Complete553.1279.0ENSORFP00005014770.1homeobox protein six1-likeJBrowse
1408at6073Complete222.6173.0ENSORFP00005022592.1dnaJ homolog subfamily C member 12-likeJBrowse
1419at6073Duplicated719.9344.0ENSORFP00005016707.1protein arginine N-methyltransferase 1JBrowse
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