BUSCO Gene Details in Scolanthus callimorphus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Scolanthus callimorphusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 74.0% [S: 60.0%, D: 14.1%] F: 14.8%, M: 11.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,371 (74.0%)1,921 (60.0%)450 (14.1%)473 (14.8%)359 (11.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Scolanthus callimorphus: 3,303 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
1748at6073Complete527.6250.0NY_Scal100_v1.30567.1Succinate dehydrogenase JBrowse
1757at6073Complete923.5490.0NY_Scal100_v1.1623.1frizzled-1-likeJBrowse
1790at6073Complete253.9216.0NY_Scal100_v1.11108.1short stature homeobox proteinJBrowse
1838at6073Complete331.0174.0NY_Scal100_v1.11030.1SPRY domain-containing protein 7JBrowse
1859at6073Complete238.3160.0NY_Scal100_v1.4221.1uncharacterized protein C16orf52 homologJBrowse
1880at6073Complete838.7437.0NY_Scal100_v1.23478.1GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferaseJBrowse
1920at6073Complete544.0293.0NY_Scal100_v1.11040.1kidney mitochondrial carrier protein 1JBrowse
1944at6073Complete666.2353.0NY_Scal100_v1.50124.1mitogen-activated protein kinase 14JBrowse
2020at6073Complete325.6181.0NY_Scal100_v1.38269.1DNA replication complex GINS protein PSF3-likeJBrowse
2036at6073Duplicated196.290.0NY_Scal100_v1.18367.1small nuclear ribonucleoprotein EJBrowse
2036at6073Duplicated196.290.0NY_Scal100_v1.51508.1small nuclear ribonucleoprotein EJBrowse
2051at6073Fragmented637.0367.0NY_Scal100_v1.2510.1Fucose-1-phosphate guanylyltransferaseJBrowse
2052at6073Complete355.8194.0NY_Scal100_v1.18506.1mitochondrial inner membrane protease ATP23JBrowse
2093at6073Complete929.1488.0NY_Scal100_v1.32059.1protein O-glucosyltransferase 2JBrowse
2095at6073Duplicated1213.4607.0NY_Scal100_v1.38844.1bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthaseJBrowse
2095at6073Duplicated1137.6588.0NY_Scal100_v1.27844.1bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthaseJBrowse
2197at6073Complete492.9312.0NY_Scal100_v1.48671.1protein FAM228BJBrowse
2201at6073Complete737.0433.0NY_Scal100_v1.53574.1vesicular glutamate transporter 2JBrowse
2225at6073Fragmented225.7145.0NY_Scal100_v1.34620.1protein Hikeshi-likeJBrowse
2251at6073Complete353.8247.0NY_Scal100_v1.14739.1protein AMN1 homologJBrowse
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