BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
24566at6073Complete411.9254.0alor_g7034.t1tubulin polyglutamylase complex subunit 1JBrowse
24570at6073Duplicated870.0512.0alor_g20253.t1CDK5 regulatory subunit-associated protein 3JBrowse
24570at6073Duplicated864.4512.0alor_g20253.t2CDK5 regulatory subunit-associated protein 3JBrowse
24579at6073Fragmented223.4171.0alor_g12160.t1single-stranded DNA-binding protein 3-likeJBrowse
24580at6073Complete358.5236.0alor_g23817.t1leucine-rich repeat-containing protein 61JBrowse
24594at6073Complete719.2565.0alor_g9779.t1la-related protein 7JBrowse
24622at6073Duplicated710.8413.0alor_g11188.t1Transducin beta-like protein 2JBrowse
24622at6073Duplicated763.0410.0alor_g11184.t2Transducin beta-like protein 2JBrowse
24622at6073Duplicated698.5362.0alor_g11184.t1Transducin beta-like protein 2JBrowse
24625at6073Complete157.777.0alor_g2778.t1small integral membrane protein 7JBrowse
24653at6073Fragmented477.9275.0alor_g21297.t1Actin-binding LIM 1JBrowse
24660at6073Complete271.1159.0alor_g24494.t1Vitamin K epoxide reductase complex subunit 1 1JBrowse
24681at6073Complete1218.1721.0alor_g16122.t1GTPase-activating Rap/Ran-GAP domain-like protein 3JBrowse
24708at6073Fragmented609.3390.0alor_g3316.t1uncharacterized protein C7orf31-likeJBrowse
24716at6073Complete1486.0884.0alor_g2221.t1lysine-specific demethylase 7A-likeJBrowse
24740at6073Complete102.6379.0alor_g5834.t1UNC93-like protein MFSD11JBrowse
24756at6073Complete714.8414.0alor_g11264.t1Ubiquinone biosynthesis monooxygenase COQ6JBrowse
24820at6073Complete1792.8855.0alor_g1065.t1coatomer subunit gamma-2-likeJBrowse
24825at6073Complete637.0320.0alor_g11155.t1UDP-glucose 4-epimeraseJBrowse
24867at6073Complete400.9286.0alor_g7314.t1neuroguidin-likeJBrowse
Go to page: of 167 pages
TOP