BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
16601at6073Complete837.9590.0XP_074622014.1BRCA1-associated RING domain protein 1JBrowse
16629at6073Duplicated1065.8601.0XP_074635038.1ankyrin repeat domain-containing protein 13D-likeJBrowse
16629at6073Duplicated1064.9601.0XP_074635037.1ankyrin repeat domain-containing protein 13D-likeJBrowse
16631at6073Duplicated864.4399.0XP_074627377.1Cyclin-dependent kinase 8JBrowse
16631at6073Duplicated839.1399.0XP_074627372.1Cyclin-dependent kinase 8JBrowse
16631at6073Duplicated839.1399.0XP_074627373.1Cyclin-dependent kinase 8JBrowse
16631at6073Duplicated828.3394.0XP_074627374.1Cyclin-dependent kinase 8JBrowse
16631at6073Duplicated827.7379.0XP_074627376.1Cyclin-dependent kinase 8JBrowse
16635at6073Complete1149.8702.0XP_074628993.1Double zinc ribbon and ankyrin repeat-containing 1JBrowse
16676at6073Complete670.5439.0XP_074612813.1Methyltransferase-like protein 25JBrowse
16717at6073Complete743.0438.0XP_074612625.1major facilitator superfamily domain-containing protein 7-likeJBrowse
16788at6073Duplicated1069.0556.0XP_074616187.1protein SCAI-likeJBrowse
16788at6073Duplicated1026.3556.0XP_074616193.1protein SCAI-likeJBrowse
16884at6073Complete400.1246.0XP_074624737.1paired mesoderm homeobox protein 2JBrowse
16906at6073Duplicated1519.4926.0XP_074615699.1Serine/threonine-protein phosphatase 6 regulatory subunit 3-AJBrowse
16906at6073Duplicated1515.9926.0XP_074615698.1Serine/threonine-protein phosphatase 6 regulatory subunit 3-AJBrowse
16997at6073Duplicated166.3109.0XP_074615570.1HIG1 domain family member 2A, mitochondrialJBrowse
16997at6073Duplicated166.3109.0XP_074615571.1HIG1 domain family member 2A, mitochondrialJBrowse
17010at6073Complete1119.1551.0XP_074608542.1dual specificity tyrosine-phosphorylation-regulated kinase 2JBrowse
17013at6073Complete477.0374.0XP_074610870.1mediator of RNA polymerase II transcription subunit 26JBrowse
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