BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
27793at6073Complete568.5444.0HOLI00932.G38084OTU domain-containing protein 5JBrowse
27903at6073Complete464.7291.0HOLI02437.G12013RNA demethylase ALKBH5JBrowse
27921at6073Fragmented317.2275.0HOLI01161.G4359sphingosine-1-phosphate phosphatase 2JBrowse
27951at6073Complete617.8388.0HOLI00443.G34842Voltage-dependent L-type calcium channel subunit beta-2JBrowse
27977at6073Duplicated206.3161.0HOLI00164.G13527histone deacetylase complex subunit SAP18JBrowse
27977at6073Duplicated218.9154.0HOLI00991.G48072histone deacetylase complex subunit SAP18JBrowse
28012at6073Complete1154.9642.0HOLI00211.G58313Myotubularin-related protein 6JBrowse
28023at6073Complete308.6203.0HOLI01438.G25485UPF0598 protein CG30010JBrowse
28035at6073Fragmented353.6229.0HOLI00612.G24357phosphatidylinositol 5-phosphate 4-kinase type-2 alpha-likeJBrowse
28093at6073Complete232.3270.0HOLI01334.G24791homeobox protein Nkx-2.5JBrowse
28094at6073Complete290.5225.0HOLI02480.G22449AN1-type zinc finger protein 2A-likeJBrowse
28102at6073Complete216.7134.0HOLI00899.G24070protein PBDC1-likeJBrowse
28107at6073Complete270.5147.0HOLI00062.G37252allograft inflammatory factor 1JBrowse
28113at6073Fragmented476.2339.0HOLI03100.G3562cyclin-dependent kinase-like 2JBrowse
28129at6073Complete634.2426.0HOLI00225.G38511transmembrane protein 39A-likeJBrowse
28163at6073Complete504.4436.0HOLI00803.G13897cytoplasmic tRNA 2-thiolation protein 2JBrowse
28165at6073Complete420.2226.0HOLI00121.G59795homeobox protein SIX6-likeJBrowse
28166at6073Complete143.5104.0HOLI00017.G41778Protein dpy-30JBrowse
28180at6073Complete358.9249.0HOLI01535.G41479dnaJ homolog subfamily C member 9JBrowse
28296at6073Fragmented238.9171.0HOLI00534.G2499039S ribosomal protein L37, mitochondrialJBrowse
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