BUSCO Gene Details in Acropora millepora

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora milleporaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 97.9% [S: 70.7%, D: 27.3%] F: 0.4%, M: 1.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,137 (97.9%)2,264 (70.7%)873 (27.3%)14 (0.4%)52 (1.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora millepora: 4,695 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
17399at6073Duplicated1846.31090.0XP_029185487.2bromodomain-containing protein 1JBrowse
17431at6073Complete6513.14536.0XP_044176472.1Protocadherin Fat 4JBrowse
17432at6073Duplicated2346.61504.0XP_029196844.2NACHT and WD repeat domain-containing protein 2JBrowse
17432at6073Duplicated2342.71504.0XP_044175217.1NACHT and WD repeat domain-containing protein 2JBrowse
17438at6073Complete611.6354.0XP_029213988.2nucleoporin Nup43JBrowse
17443at6073Complete269.3135.0XP_029197426.1RING finger protein 11JBrowse
17446at6073Complete1156.4535.0XP_029196572.2DET1 homologJBrowse
17468at6073Duplicated890.1608.0XP_029213413.2SET and MYND domain-containing protein 4JBrowse
17468at6073Duplicated890.1608.0XP_029213414.2SET and MYND domain-containing protein 4JBrowse
17468at6073Duplicated890.1608.0XP_029213415.2SET and MYND domain-containing protein 4JBrowse
17468at6073Duplicated890.1608.0XP_029213416.2SET and MYND domain-containing protein 4JBrowse
17468at6073Duplicated890.1608.0XP_029213417.2SET and MYND domain-containing protein 4JBrowse
17485at6073Complete816.6514.0XP_044181241.1inactive ubiquitin carboxyl-terminal hydrolase 54-likeJBrowse
17520at6073Duplicated874.6467.0XP_029205163.2Coiled-coil domain-containing protein 77JBrowse
17520at6073Duplicated874.6467.0XP_029205164.2Coiled-coil domain-containing protein 77JBrowse
17520at6073Duplicated751.3408.0XP_029205165.2Coiled-coil domain-containing protein 77JBrowse
17523at6073Complete957.2542.0XP_029198016.2conserved oligomeric Golgi complex subunit 8JBrowse
17529at6073Complete1137.9629.0XP_029186980.2RUN and FYVE domain-containing protein 1JBrowse
17543at6073Complete347.8208.0XP_029184819.1uncharacterized protein LOC114952910JBrowse
17564at6073Complete345.9223.0XP_029188726.2RPA-interacting protein AJBrowse
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