BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
25371at6073Complete253.0162.0alor_g4813.t1nucleolar protein 16JBrowse
25449at6073Fragmented372.3252.0alor_g11850.t1heat shock factor 2-binding protein-likeJBrowse
25456at6073Duplicated596.7347.0alor_g4087.t1upstream stimulatory factor 1JBrowse
25456at6073Duplicated583.5347.0alor_g4087.t2upstream stimulatory factor 1JBrowse
25469at6073Complete412.5298.0alor_g1352.t1alpha-2-macroglobulin receptor-associated proteinJBrowse
25507at6073Complete429.2204.0alor_g1402.t160S ribosomal protein L15JBrowse
25530at6073Complete292.4187.0alor_g10737.t1vacuolar protein sorting-associated protein 37B-likeJBrowse
25560at6073Complete323.7184.0alor_g21995.t1bcl-2-like protein 1-likeJBrowse
25608at6073Complete210.9134.0alor_g18185.t1transmembrane protein 216JBrowse
25617at6073Complete321.0158.0alor_g16635.t1Zinc finger HIT domain-containing protein 1JBrowse
25651at6073Complete681.2364.0alor_g2477.t1beta-parvin-likeJBrowse
25705at6073Complete268.9166.0alor_g14069.t1Josephin-2JBrowse
25713at6073Complete325.7193.0alor_g6915.t1mitochondrial import inner membrane translocase subunit Tim29JBrowse
25737at6073Complete590.0324.0alor_g11183.t1AH receptor-interactingJBrowse
25772at6073Complete570.5411.0alor_g9122.t1forkhead box protein C1-BJBrowse
25805at6073Complete1232.6821.0alor_g25801.t1nonsense-mediated mRNA decay factor SMG5JBrowse
25815at6073Duplicated500.3284.0alor_g12578.t1cyclic AMP-responsive element-binding protein 1-likeJBrowse
25815at6073Duplicated474.3284.0alor_g12578.t2cyclic AMP-responsive element-binding protein 1-likeJBrowse
25831at6073Complete223.6105.0alor_g15025.t1AsterixJBrowse
25839at6073Complete587.6291.0alor_g19118.t1Beta-soluble NSF attachmentJBrowse
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