BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
28638at6073Fragmented227.7199.0HOLI01154.G27848guanine nucleotide-binding protein subunit beta-like protein 1JBrowse
28742at6073Complete376.6276.0HOLI00309.G59346tRNA selenocysteine 1-associated protein 1JBrowse
28751at6073Complete198.4128.0HOLI00845.G34135sterile alpha motif domain-containing protein 15-likeJBrowse
28811at6073Complete499.0352.0HOLI00027.G33026solute carrier family 25 member 46JBrowse
28920at6073Duplicated344.1277.0HOLI01486.G41713nocturnin-likeJBrowse
28920at6073Duplicated316.1262.0HOLI07395.G14813nocturnin-likeJBrowse
28964at6073Complete157.7255.0HOLI02071.G57890sprouty-related, EVH1 domain-containing protein 1-likeJBrowse
29012at6073Fragmented729.1376.0HOLI02061.G16294Origin recognition complex, subunit 1JBrowse
29018at6073Complete711.4483.0HOLI00212.G45596lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complexJBrowse
29042at6073Complete885.6722.0HOLI00297.G54574la-related protein 1B-likeJBrowse
29100at6073Complete202.4214.0HOLI02571.G24616uncharacterized protein LOC116290135JBrowse
29101at6073Complete226.2134.0HOLI01606.G41947ubiquitin-like protein FUBIJBrowse
29109at6073Complete340.3345.0HOLI02323.G11543uncharacterized protein LOC124813747JBrowse
29182at6073Complete923.8595.0HOLI01366.G59970adenylate kinase 7JBrowse
29249at6073Complete364.2358.0HOLI00360.G7076Transcription factor AP-1JBrowse
29298at6073Complete388.4282.0HOLI02296.G38060protein mono-ADP-ribosyltransferase PARP16-likeJBrowse
29339at6073Complete204.8286.0HOLI00467.G54084zinc finger protein 2-likeJBrowse
29365at6073Complete618.9658.0HOLI01307.G44029uncharacterized protein LOC110065606 isoform X1JBrowse
29405at6073Fragmented984.2209.0HOLI01114.G27923papilin-likeJBrowse
29408at6073Complete728.2366.0HOLI02263.G30526ethanolamine-phosphate cytidylyltransferaseJBrowse
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