BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 2,721 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
32583at6073Complete972.4839BRAKERHOCP00005004640.1F-box only 10JBrowse
32594at6073Complete692.3467BRAKERHOCP00005001910.1DNA primase large subunitJBrowse
32606at6073Complete186.7238BRAKERHOCP00005002993.1uncharacterized protein LOC114523170JBrowse
32624at6073Complete550.1320BRAKERHOCP00005018479.1protein FAM50A-like isoform X1JBrowse
32649at6073Complete929.21103BRAKERHOCP00005012573.1ras GTPase-activating protein nGAP-likeJBrowse
32675at6073Complete776.8525BRAKERHOCP00005019179.1Guanine nucleotide-binding protein-like 3JBrowse
32704at6073Complete566.7402BRAKERHOCP00005012851.1calcium/calmodulin-dependent protein kinase kinase 2JBrowse
32711at6073Complete568.4500BRAKERHOCP00005002484.1Chondroitin sulfate N-acetylgalactosaminyltransferase 1JBrowse
32718at6073Complete190.7168BRAKERHOCP00005006494.139S ribosomal protein L40, mitochondrialJBrowse
32858at6073Complete356.2294BRAKERHOCP00005013790.1heparan sulfate 2-O-sulfotransferase 1JBrowse
32867at6073Complete982.9737BRAKERHOCP00005004539.1lymphocyte-specific helicase-likeJBrowse
32872at6073Complete732.7465BRAKERHOCP00005019852.1transcription factor RFX4-likeJBrowse
32883at6073Fragmented252.0196BRAKERHOCP00005007012.1speedy protein 1-AJBrowse
32900at6073Complete743.2429BRAKERHOCP00005002887.1N6-adenosine-methyltransferase non-catalytic subunit-likeJBrowse
32915at6073Complete296.8282BRAKERHOCP00005014581.1low density lipoprotein receptor adapter protein 1JBrowse
32920at6073Fragmented237.5112BRAKERHOCP00005000902.1Small ribosomal subunit protein uS19JBrowse
33020at6073Complete307.8197BRAKERHOCP00005005333.1pre-rRNA-processing protein esf2JBrowse
33032at6073Fragmented152.2225BRAKERHOCP00005007454.1coiled-coil domain-containing protein 169JBrowse
33041at6073Complete1241.11270BRAKERHOCP00005017272.1Fanconi anemia group I proteinJBrowse
33052at6073Fragmented796.0896BRAKERHOCP00005007716.1uncharacterized protein LOC107331131 isoform X1JBrowse
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