BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
26417at6073Complete330.6206.0alor_g24514.t1probable pyridoxal 5'-phosphate synthase subunit PDX2JBrowse
26507at6073Fragmented302.4164.0alor_g19117.t1N-alpha-acetyltransferase 40JBrowse
26534at6073Complete459.6283.0alor_g16909.t1calmodulin-lysine N-methyltransferaseJBrowse
26544at6073Complete424.7252.0alor_g5956.t1nudix hydrolase 8-likeJBrowse
26595at6073Complete974.4602.0alor_g24121.t1nicastrin-likeJBrowse
26600at6073Complete677.4452.0alor_g25431.t1E3 ubiquitin-protein ligase RNF8-likeJBrowse
26635at6073Complete421.6210.0alor_g17366.t1Charged multivesicular body protein 5JBrowse
26694at6073Complete749.9434.0alor_g20649.t1uncharacterized protein LOC116308058JBrowse
26695at6073Fragmented392.9223.0alor_g7439.t1solute carrier family 35 member C2-likeJBrowse
26707at6073Complete776.9444.0alor_g16194.t1glycoprotein endo-alpha-1,2-mannosidaseJBrowse
26723at6073Complete655.3429.0alor_g23503.t1E3 ubiquitin-protein ligase TRIM71-likeJBrowse
26737at6073Complete1798.5938.0alor_g3575.t1unconventional myosin-Id-likeJBrowse
26744at6073Complete713.7488.0alor_g21772.t1dual specificity protein phosphatase 16-likeJBrowse
26747at6073Complete536.9518.0alor_g12376.t1nibrinJBrowse
26812at6073Complete259.0181.0alor_g11336.t1tyrosine-protein kinase BTKJBrowse
26824at6073Complete1123.0642.0alor_g21710.t1Signal recognition particle subunit SRP72JBrowse
26832at6073Complete391.2225.0alor_g8888.t1peroxisomal membrane protein 11AJBrowse
26841at6073Complete798.8436.0alor_g13514.t1cytoplasmic dynein 1 light intermediate chain 1JBrowse
26887at6073Duplicated1167.3618.0alor_g12853.t1serine/threonine kinase-like domain-containing protein STKLD1JBrowse
26887at6073Duplicated1027.9592.0alor_g8.t1serine/threonine kinase-like domain-containing protein STKLD1JBrowse
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