BUSCO Gene Details in Millepora alcicornis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Millepora alcicornisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 53.9% [S: 48.6%, D: 5.3%] F: 15.8%, M: 30.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
1,725 (53.9%)1,556 (48.6%)169 (5.3%)505 (15.8%)973 (30.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Millepora alcicornis: 2,434 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
37556at6073Fragmented312.0274.0ENSCIQP00000002286.1Krueppel-like factor 11JBrowse
37667at6073Duplicated573.1289.0ENSCIQP00000021659.1collagen alpha-1(II) chain-likeJBrowse
37667at6073Duplicated540.5288.0ENSCIQP00000021667.1collagen alpha-1(II) chain-likeJBrowse
37681at6073Fragmented1746.61366.0ENSCIQP00000016599.1probable voltage-dependent N-type calcium channel subunit alpha-1BJBrowse
37731at6073Complete178.5125.0ENSCIQP00000022904.1programmed cell death protein 5JBrowse
37759at6073Fragmented174.1130.0ENSCIQP00000022474.1VPS9 domain-containing protein 1JBrowse
37916at6073Duplicated492.7351.0ENSCIQP00000013905.1Nucleobindin-2JBrowse
37916at6073Duplicated490.5351.0ENSCIQP00000013912.1Nucleobindin-2JBrowse
37927at6073Complete716.5635.0ENSCIQP00000017691.1protein arginine N-methyltransferase 7JBrowse
37965at6073Fragmented445.3311.0ENSCIQP00000005939.1zinc finger protein 474JBrowse
38075at6073Complete403.0310.0ENSCIQP00000000129.1UV excision repair protein RAD23 homolog AJBrowse
38088at6073Complete463.0470.0ENSCIQP00000011729.1rho GTPase-activating protein 19JBrowse
38171at6073Complete719.2485.0ENSCIQP00000017201.1bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66-likeJBrowse
38266at6073Complete385.1243.0ENSCIQP00000017129.1YIPF4JBrowse
38267at6073Fragmented216.7111.0ENSCIQP00000010856.128S ribosomal protein S18b, mitochondrial-likeJBrowse
38279at6073Fragmented115.889.0ENSCIQP00000013123.1uncharacterized protein LOC116304506JBrowse
38295at6073Fragmented151.7154.0ENSCIQP00000002571.1cytoskeleton-associated protein 2-likeJBrowse
38374at6073Complete440.6396.0ENSCIQP00000001230.1transcription factor 7-like 2JBrowse
38385at6073Complete350.4212.0ENSCIQP00000023239.1charged multivesicular body protein 4c-likeJBrowse
38456at6073Complete351.8264.0ENSCIQP00000017573.1uncharacterized protein LOC122947989JBrowse
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