BUSCO Gene Details in Acropora millepora

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora milleporaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 97.9% [S: 70.7%, D: 27.3%] F: 0.4%, M: 1.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,137 (97.9%)2,264 (70.7%)873 (27.3%)14 (0.4%)52 (1.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora millepora: 4,695 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
18667at6073Complete240.2116.0XP_029214045.1transcription initiation factor TFIID subunit 13JBrowse
18686at6073Complete550.2260.0XP_044177101.1proteasome subunit beta type-7JBrowse
18704at6073Duplicated582.6307.0XP_029213895.2WD repeat-containing protein 38JBrowse
18704at6073Duplicated528.0280.0XP_044180419.1WD repeat-containing protein 38JBrowse
18707at6073Duplicated738.9446.0XP_029189468.2spermatogenesis-associated protein 6-likeJBrowse
18707at6073Duplicated667.5417.0XP_029189469.2spermatogenesis-associated protein 6-likeJBrowse
18742at6073Complete1054.8641.0XP_044180230.1E3 ubiquitin-protein ligase CBL-B-B-likeJBrowse
18784at6073Complete1775.3846.0XP_044174003.1major vault proteinJBrowse
18842at6073Complete780.6361.0XP_029203753.1ubiquitin carboxyl-terminal hydrolase 46JBrowse
18892at6073Duplicated500.7306.0XP_029204583.2RNA pseudouridylate synthase domain-containing protein 4JBrowse
18892at6073Duplicated444.0271.0XP_029204584.2RNA pseudouridylate synthase domain-containing protein 4JBrowse
18919at6073Complete433.8231.0XP_029197366.2nanos homolog 1JBrowse
18927at6073Complete957.1637.0XP_029198851.2E3 ubiquitin-protein ligase RNF216JBrowse
18942at6073Complete286.7161.0XP_029192527.1deoxyuridine 5'-triphosphate nucleotidohydrolaseJBrowse
18945at6073Complete713.9391.0XP_029191614.1E3 ubiquitin-protein ligase RNFT1-likeJBrowse
19054at6073Complete876.3462.0XP_044163088.1actin-related protein 10JBrowse
19098at6073Complete164.599.0XP_029200528.2uncharacterized bolA-like protein C4B3.11cJBrowse
19102at6073Complete967.6538.0XP_029195890.2CAP Gly-rich domainJBrowse
19190at6073Complete760.9750.0XP_029213443.2death domain-associated protein 6JBrowse
19201at6073Duplicated1446.81015.0XP_029184909.2GTPase-activating protein and VPS9 domain-containing protein 1JBrowse
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