BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 2,721 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
33814at6073Complete540.0419BRAKERHOCP00005017756.1major facilitator superfamily domain-containing protein 10JBrowse
33843at6073Fragmented165.7215BRAKERHOCP00005001267.1zinc finger CCCH domain-containing protein 14JBrowse
33880at6073Complete1064.9598BRAKERHOCP00005014667.1NEDD4-like E3 ubiquitin-protein ligase WWP1JBrowse
33906at6073Complete406.8540BRAKERHOCP00005020700.1ribosomal RNA processing protein 1 homolog AJBrowse
33923at6073Complete1160.3923BRAKERHOCP00005020308.1U2 snRNP-associated SURP motif-containing proteinJBrowse
33943at6073Duplicated782.6525BRAKERHOCP00005016075.1Solute carrier family 28 member 3JBrowse
33943at6073Duplicated859.9517BRAKERHOCP00005014891.1Solute carrier family 28 member 3JBrowse
33963at6073Fragmented176.3194BRAKERHOCP00005016491.1myc proto-oncogene protein-likeJBrowse
34040at6073Complete389.3358BRAKERHOCP00005008087.1protein FAM98A-likeJBrowse
34066at6073Complete281.5350BRAKERHOCP00005006832.1Peptidase S1, PA clanJBrowse
34084at6073Complete436.2295BRAKERHOCP00005006315.1CCR4-NOT transcription complex subunit 2JBrowse
34174at6073Complete461.3324BRAKERHOCP00005016627.1serine protease HTRA2, mitochondrial-likeJBrowse
34220at6073Fragmented144.992BRAKERHOCP00005012855.1Vesicle-associated membrane protein 4JBrowse
34240at6073Complete653.8654BRAKERHOCP00005003977.1uncharacterized protein LOC116294835JBrowse
34336at6073Complete766.5645BRAKERHOCP00005017745.1transcription elongation regulator 1JBrowse
34361at6073Complete1016.21516BRAKERHOCP00005015171.1AT-rich interactive domain-containing protein 1B-likeJBrowse
34369at6073Fragmented281.7228BRAKERHOCP00005000576.1tubulinyl-Tyr carboxypeptidase 2JBrowse
34425at6073Complete608.8412BRAKERHOCP00005005629.1glutamate-rich WD repeat-containing protein 1JBrowse
34429at6073Complete194.7154BRAKERHOCP00005010089.1Ribosomal proteinJBrowse
34506at6073Complete305.0242BRAKERHOCP00005000362.1inhibitor of growth protein 1JBrowse
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