BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 2,721 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
34529at6073Complete1012.6668BRAKERHOCP00005004891.1SDA1 homologJBrowse
34530at6073Complete687.5483BRAKERHOCP00005005109.1periodic tryptophan protein 1 homologJBrowse
34566at6073Complete811.01298BRAKERHOCP00005014573.1rho GTPase-activating protein 20JBrowse
34601at6073Complete393.0351BRAKERHOCP00005020337.1integral membrane protein GPR180-likeJBrowse
34603at6073Complete123.6104BRAKERHOCP00005008177.1huntingtin-interacting protein KJBrowse
34625at6073Fragmented344.2261BRAKERHOCP00005007466.1p21-activated protein kinase-interacting protein 1-likeJBrowse
34653at6073Complete642.7412BRAKERHOCP00005006747.1RNA polymerase II-associated factor 1 homologJBrowse
34690at6073Complete421.7338BRAKERHOCP00005019876.1cyclinJBrowse
34697at6073Complete414.8517BRAKERHOCP00005011283.1rab11 family-interacting protein 3JBrowse
34707at6073Complete249.9319BRAKERHOCP00005008806.1hydrolethalus syndrome protein 1 homologJBrowse
34758at6073Complete635.6543BRAKERHOCP00005007369.1ATP-dependent RNA helicase DDX24-likeJBrowse
34769at6073Complete350.8317BRAKERHOCP00005011383.1phosphatidate cytidylyltransferase, mitochondrialJBrowse
34808at6073Complete647.1828BRAKERHOCP00005002546.1Calcineurin-binding protein cabin-1JBrowse
34868at6073Complete278.4255BRAKERHOCP00005019621.1phosducin-like proteinJBrowse
34958at6073Complete123.7126BRAKERHOCP00005009412.1ribonuclease H2 subunit CJBrowse
34981at6073Complete171.7136BRAKERHOCP00005021100.1molybdopterin synthase catalytic subunit-likeJBrowse
34994at6073Complete607.8345BRAKERHOCP00005008034.1magnesium transporter NIPA2-likeJBrowse
35004at6073Complete124.2204BRAKERHOCP00005007132.1thyrotroph embryonic factor-likeJBrowse
35026at6073Complete403.5289BRAKERHOCP00005008077.1general transcription factor IIE subunit 2JBrowse
35027at6073Complete613.9468BRAKERHOCP00005006855.1WASH complex subunit 1JBrowse
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