BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
31713at6073Complete977.5709.0HOLI00371.G32764zinc finger FYVE domain-containing protein 9JBrowse
31808at6073Complete356.8455.0HOLI01537.G57823protein FAM227B-likeJBrowse
31825at6073Complete215.5186.0HOLI00389.G39502transmembrane emp24 domain-containing protein 1-likeJBrowse
31846at6073Complete360.1197.0HOLI00388.G27522Polyadenylate-binding protein 2JBrowse
31888at6073Complete439.7368.0HOLI01496.G41705Lysophosphatidic acid phosphatase type 6JBrowse
31891at6073Complete804.8594.0HOLI00602.G59376Polycomb protein suz12JBrowse
31902at6073Complete322.5305.0HOLI02021.G57932doublesex and mab-3 related transcription factor 3, truncatedJBrowse
31919at6073Complete512.5335.0HOLI00314.G29074protein XRP2-likeJBrowse
32022at6073Complete590.3400.0HOLI00077.G24092general transcription factor IIE subunit 1JBrowse
32099at6073Complete215.7171.0HOLI00871.G15584methylosome subunit pIClnJBrowse
32161at6073Fragmented255.9213.0HOLI02564.G39543proline-rich protein 5JBrowse
32183at6073Fragmented70.068.0HOLI00073.G39111selenoprotein SJBrowse
32193at6073Complete404.0175.0HOLI00234.G42574dual specificity protein phosphatase 22JBrowse
32204at6073Complete212.5190.0HOLI00135.G6383survival of motor neuron-related-splicing factor 30JBrowse
32291at6073Complete486.6339.0HOLI00889.G45440renalase-likeJBrowse
32313at6073Complete1038.4482.0HOLI00722.G39471histone deacetylase 1JBrowse
32413at6073Fragmented404.3265.0HOLI00087.G59724Protein tyrosine phosphatase domain-containing protein 1JBrowse
32456at6073Complete500.8329.0HOLI00217.G8138Centrosomal protein of 41 kDaJBrowse
32474at6073Complete289.6338.0HOLI00133.G23288Fibrous sheath-interacting protein 1JBrowse
32550at6073Complete821.9968.0HOLI00970.G16402E3 ubiquitin-protein ligase PDZRN3JBrowse
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