BUSCO Gene Details in Acropora echinata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora echinataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.0% [S: 66.3%, D: 12.6%] F: 12.4%, M: 8.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,530 (79.0%)2,125 (66.3%)405 (12.6%)397 (12.4%)276 (8.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora echinata: 3,435 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2093at6073Complete956.8489.0aech_s0113.g33.t1protein O-glucosyltransferase 2JBrowse
2095at6073Duplicated1289.5610.0aech_s0033.g29.t1bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthaseJBrowse
2095at6073Duplicated1287.7610.0aech_s0033.g29.t2bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthaseJBrowse
2197at6073Complete519.6312.0aech_s0003.g498.t1protein FAM228BJBrowse
2201at6073Duplicated631.7460.0aech_s0092.g50.t1vesicular glutamate transporter 2JBrowse
2201at6073Duplicated630.6444.0aech_s0092.g49.t1vesicular glutamate transporter 2JBrowse
2225at6073Complete362.4193.0aech_s0021.g57.t1protein Hikeshi-likeJBrowse
2251at6073Complete407.8249.0aech_s0084.g56.t1protein AMN1 homologJBrowse
2255at6073Complete1143.2514.0aech_s0045.g25.t1Kelch repeat type 1JBrowse
2281at6073Complete266.2178.0aech_s0002.g221.t1Dynein heavy chain AAA lid domainJBrowse
2297at6073Complete898.4411.0aech_s0004.g356.t1adenosylhomocysteinase AJBrowse
2333at6073Complete722.3425.0aech_s0001.g295.t1carbohydrate sulfotransferase 1JBrowse
2340at6073Duplicated720.3374.0aech_s0177.g64.t1Endoplasmic reticulum-Golgi intermediate compartment protein 2JBrowse
2340at6073Duplicated713.4374.0aech_s0177.g64.t2Endoplasmic reticulum-Golgi intermediate compartment protein 2JBrowse
2385at6073Fragmented195.2147.0aech_s0049.g29.t1polyhomeotic-like protein 2JBrowse
2419at6073Complete206.9121.0aech_s0019.g33.t1nuclear transport factor 2JBrowse
2440at6073Complete382.4224.0aech_s0111.g86.t1uncharacterized protein LOC116287038JBrowse
2456at6073Complete287.5183.0aech_s0026.g87.t1transmembrane protein 267-likeJBrowse
2501at6073Complete263.2117.0aech_s0004.g252.t1Gamma-aminobutyric acid receptor-associated -like 2JBrowse
2559at6073Complete592.4285.0aech_s0011.g371.t1BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3JBrowse
Go to page: of 172 pages
TOP